Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 84/328 (25%), Positives = 138/328 (42%), Gaps = 31/328 (9%)

Query: 1   MTTRRKLLGAAGAVALMAMGATSAMAQEVTLKLHQFLPAQANVPKLI-LDVWADKVEASS 59
           M  +RKLL  A   A    G   AM    TLK+ +  PA    P ++ ++    K+E ++
Sbjct: 1   MNLKRKLLVTALPFAFCISGLAHAM----TLKIAEIHPA--GYPTVVAMENLGKKLETAT 54

Query: 60  DGRIKIDRYPSMQLGGKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMTNAR 119
           +G IK   +    LG +  E+++Q   G   +    +G      P+T VF +PF+  +  
Sbjct: 55  NGEIKSRMFAGGVLGSEK-EVIEQTQIGAVQLTRVSLGSVGPVVPATNVFNMPFVFRDID 113

Query: 120 AASHAY-WEMFDEHMKDTEFKDVKILG-TWVH-GPGIIHTTDPVESPDDLRGMKIRGGGR 176
                   E+  E +      D  ++G  W+  G   ++T  P+   +DL+GMKIR  G 
Sbjct: 114 HMRKVVDGEIGQEILDAITNSDFNMVGLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIGN 173

Query: 177 SV-NGLLTELGATPVGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEFTGRA 235
            +    L  +GA  + M    I  AL  GVIDG             P L+E H  F    
Sbjct: 174 PLFIDTLNAMGANGIAMDTGEIFSALQSGVIDG--------AENNSPTLLE-HNHFRVAK 224

Query: 236 LYTLTF------VLAMNKEKYESLPDDLKKAVDENSGLEFSVFAGGTMADADTPAREFAL 289
            YT T        L M+K+ +  L  + ++A  +    E  +         +T + E   
Sbjct: 225 HYTQTHHLILPEPLLMSKDTWNKLSPE-QQATVKKLAKEAQLEERDLWVAKETASNEKLK 283

Query: 290 DEGNNVITLDEEQTAIWREASQPIYKQW 317
            EG   I +D   T  + +A+ P+ +++
Sbjct: 284 AEGVEFIEVD---TKPFYDATAPVREKY 308