Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 346 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 15/335 (4%)

Query: 10  AAGAVALMAMGATSAMAQEVTLKLHQFL-PAQANVPKLILDVWADKVEASSDGRIKIDRY 68
           AA  V  +A+ A    A+ V    H     A  N    +  V+ + VE +++ R++++ +
Sbjct: 11  AACTVLALALAAAGVSAETVIKLAHPNRNDAFDNTAGAMAIVFKNHVEVATEKRVRVEIF 70

Query: 69  PSMQLG--GKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMTNARAASHAYW 126
           P  Q+G  G   +L+ Q    +   + +V G  P  YP   V +LPF  ++   A   + 
Sbjct: 71  PEGQMGRDGDAVKLVRQGT--IQSAISSVGGVAP-LYPMLAVIDLPFAYSSVANAYDVFD 127

Query: 127 EMFDEHMKDTEFKDVKILGTWVHGPG----IIHTTDPVESPDDLRGMKIRGGGRSVN-GL 181
             F   + +   +   +       PG    I ++  P+  P+D++G+KIR      +  +
Sbjct: 128 GPFGHRLAEEIRRKAGLAVLGFGDPGGLFTITNSKRPIRQPEDMKGLKIRTMDLETHRTM 187

Query: 182 LTELGATPVGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEFTGRALYTLTF 241
           +  LG TPV +    +  AL  G +DG   P  +    +  E V+ H   +      L +
Sbjct: 188 IGSLGGTPVNVAWSDLYNALGTGAVDGQMNPVPIVRFARFDE-VQRHLTLSNHLF--LPY 244

Query: 242 VLAMNKEKYESLPDDLKKAVDENSGLEFSVFAGGTMADADTPAREFALDEGNNVITLDEE 301
           V  MN +  + L    + AV   + L      G +     +      L +   V TL   
Sbjct: 245 VWVMNAKFLDDLAPSDRAAVMNAARLGVVASRGLSRLIESSDRGLPPLAQRMEVHTLTPR 304

Query: 302 QTAIWREASQPIYKQWLD-DMKAKGVDGDALLEQA 335
           +   +R+ +QP  +Q ++    A+GV+  A  E+A
Sbjct: 305 EAEAFRKVTQPAVRQAIERRFGAEGVEMLAAFERA 339