Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 352 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 24/345 (6%)

Query: 2   TTRRKLLGAAGAVALMAMGATSAMAQEVTLKLHQFLPAQANVPKLILD---VWADKVEAS 58
           TT + LL  AGA+ L A    +A AQE TL+      A +N      D   V+ + VE++
Sbjct: 4   TTLKALL--AGAMLLSA--PLAATAQEYTLRA----TANSNENDEDYDGLVVFKNYVESA 55

Query: 59  SDGRIKIDRYPSMQLGGKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMTNA 118
           S+G I ++ +   QL     E +    DG  DI  +  G   G +P  +V +LP++M + 
Sbjct: 56  SNGAIAVELFIGTQLCSNGAECLQGVADGSIDIYISTSGGASGIFPYVQVLDLPYLMADD 115

Query: 119 RAASHAYWEMFDEHMKDTEFKD------VKILGTWVHGPGIIHTTDPVESPDDLRGMKIR 172
           R A       F   +++   +D      +  +G         +T   + +P D+ G+KIR
Sbjct: 116 RIAEAVLAGDFTRKVREMALEDSGGMIRLMTIGNTGGWRNFANTQRRIAAPSDMEGLKIR 175

Query: 173 GGGRSV-NGLLTELGATPVGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEF 231
                +   L+  LGA P  +P P +  +L  GV++G+         +K P+    +   
Sbjct: 176 TVVADLPQELVRVLGAAPTPIPWPELFTSLQTGVVEGSKNGITDIMGMKFPDAGLQYLTL 235

Query: 232 TGRALYTLTFVLAMNKEKYESLPDDLKK-AVDENSGLEFSVFAGGTMADADTPAREFALD 290
            G A   +  +  MN E++ S+P+DL++  VD    L+ + FA  +      PA E  + 
Sbjct: 236 DGHAY--MGALWWMNNERFLSMPEDLRRVVVDGFYALQQATFA--SPKRKSIPAYEEFVA 291

Query: 291 EGNNVITLDEEQTAIWREASQPIYKQWLDDMKAKGVDGDALLEQA 335
            G ++     E+ A ++EA+ P++  W      +G +    L +A
Sbjct: 292 GGGDLYVPTPEEKAAFKEAAAPVF-DWFKANVGRGEEVFNALNEA 335