Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 347 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  305 bits (780), Expect = 1e-87
 Identities = 158/334 (47%), Positives = 212/334 (63%), Gaps = 5/334 (1%)

Query: 12  GAVALMAMGATSAMAQEVTLKLHQFLPAQANVPKLILDVWADKVEASSDGRIKIDRYPSM 71
           GAVAL ++ A  A AQ+VTL+   FL  Q ++PK  +  WA+K+EA S+GRIK++ YP+M
Sbjct: 11  GAVAL-SLSAGLAAAQDVTLRCQHFLSPQGSIPKFFITPWAEKIEAESEGRIKVEIYPAM 69

Query: 72  QLGGKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMT-NARAASHAYWEMFD 130
           QLGGKPP L DQ  DGV D  W +  YTPGR+P +EVFELPFM T +A  +S A WE  +
Sbjct: 70  QLGGKPPALYDQIRDGVIDCGWALPAYTPGRFPESEVFELPFMTTMSAENSSRAAWEFTE 129

Query: 131 EHMKDTEFKDVKILGTWVHGPGIIHTTD-PVESPDDLRGMKIRGGGRSVNGLLTELGATP 189
           +++ +    D+ ++   VHGPG+IH    P+ S  D  G+K+RG  R  N LL  LGATP
Sbjct: 130 KYLME-RMGDIHLMAVHVHGPGVIHKKGAPIMSTADFDGLKLRGPSRQANKLLETLGATP 188

Query: 190 VGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEFTG-RALYTLTFVLAMNKE 248
           VGMPVPA PE+LSKG++DG  IPWE+   LKV EL ++HT+  G RALY   F+  MNK 
Sbjct: 189 VGMPVPAFPESLSKGIVDGGVIPWEIVPPLKVHELADSHTQIGGDRALYNTFFLWGMNKA 248

Query: 249 KYESLPDDLKKAVDENSGLEFSVFAGGTMADADTPAREFALDEGNNVITLDEEQTAIWRE 308
            YE LP+DL+  +D NSGLE S +AG  M   D    E      N + TLD+   A  R+
Sbjct: 249 TYEGLPEDLRAIIDANSGLEASAWAGRAMDQGDGLGEEVVAGTDNKIHTLDDATVAELRK 308

Query: 309 ASQPIYKQWLDDMKAKGVDGDALLEQATYLIDKY 342
               +   W+ +M+ KG+ G A+++ A  LI K+
Sbjct: 309 IGDDLTAAWIAEMEDKGLPGAAMVDDARMLITKH 342