Pairwise Alignments

Query, 348 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 350 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  278 bits (711), Expect = 2e-79
 Identities = 145/333 (43%), Positives = 201/333 (60%), Gaps = 6/333 (1%)

Query: 8   LGAAGAVALMAMGATS--AMAQEVTLKLHQFLPAQANVPKLILDVWADKVEASSDGRIKI 65
           L    A+ ++A+ ATS  ++AQEVTL+   F+   +  P   ++ WA K+EA S+GRIK+
Sbjct: 4   LSKTAALTMLAVSATSLPSLAQEVTLRFQHFVSPLSANPTYFMEPWARKIEADSNGRIKV 63

Query: 66  DRYPSMQLGGKPPELMDQAIDGVADIVWTVVGYTPGRYPSTEVFELPFMMT-NARAASHA 124
           + YP MQLGGK P + D   DG  D  W + GY PGR+P  E  ELPFM T     AS A
Sbjct: 64  ELYPFMQLGGKAPNMYDLIRDGAVDGGWVIPGYQPGRFPEAEALELPFMTTKTGEDASKA 123

Query: 125 YWEMFDEHMKDTEFKDVKILGTWVHGPGIIHTTDP-VESPDDLRGMKIRGGGRSVNGLLT 183
            W    +H+ D +F DVK++   +HG G++H   P +    D  G+K+RG  R    LL 
Sbjct: 124 AWVYTQKHLMD-DFADVKVIAAHMHGRGLVHKKGPAIAELSDFEGLKLRGPSRPATLLLR 182

Query: 184 ELGATPVGMPVPAIPEALSKGVIDGTTIPWEVTTALKVPELVENHTEFTG-RALYTLTFV 242
           E+GATPVGM VPA PEALS+GV+DG  I WE++ +LK+ EL ++HT+  G ++LY L F+
Sbjct: 183 EMGATPVGMAVPAFPEALSRGVVDGGVITWEMSPSLKLDELTDSHTDVAGDKSLYNLFFL 242

Query: 243 LAMNKEKYESLPDDLKKAVDENSGLEFSVFAGGTMADADTPAREFALDEGNNVITLDEEQ 302
            AMNK KY+SLPDDLK  +D NSG   S +AG      D   ++   D GN + T+ EE 
Sbjct: 243 WAMNKAKYDSLPDDLKAVIDANSGFAASAWAGRAHDTGDAEGKQAMADAGNEIATMSEEL 302

Query: 303 TAIWREASQPIYKQWLDDMKAKGVDGDALLEQA 335
           TA      + + + W+ +M  KG+DG  L+  A
Sbjct: 303 TAEIVTLGEAVTETWIAEMTDKGLDGAGLVADA 335