Pairwise Alignments

Query, 433 a.a., Error-prone polymerase for DNA repair (imuB or polY like) (from data) from Phaeobacter inhibens DSM 17395

Subject, 471 a.a., DNA polymerase-like protein PA0670 from Pseudomonas fluorescens FW300-N1B4

 Score =  112 bits (281), Expect = 2e-29
 Identities = 122/427 (28%), Positives = 175/427 (40%), Gaps = 39/427 (9%)

Query: 17  AADIYRDQQFLLILRRWATRYCPWVGLEGRDGLVLDISGSSHLFGGETGMLNAIRNGLMR 76
           AA+I   QQFL     WA R+   V +     +V +I  S  LFG  +     +R  L  
Sbjct: 74  AAEIEHWQQFLAA---WAYRFSSQVSVHYPRAVVFEIESSLGLFGPWSQFEARLRAELGE 130

Query: 77  VGLSAQIGLADTRGAAWALAHYGEGQAATGDMLPALQH----LPVAALRLDEKTTTALIR 132
           +G   +I  A    AA  LA+  +G     +   ALQH    LPV  + L+    TAL R
Sbjct: 131 LGFRHRIVAAPNPVAARVLANVYDGLVVPDN--EALQHHLGQLPVDRIALEPSVATALSR 188

Query: 133 LGLRKIGDLATTPRAPLARRFGANVLMRLDQALGHQAEEITPLTAPPHYGVRMTLPEPIG 192
           +GLR +  +   PR  LARRF A VL  LD   G +   +     P  + VR+ L   + 
Sbjct: 189 MGLRTLRQVQALPRHSLARRFEAQVLKHLDTLFGLRHLALAFYLPPDRFDVRIELNFDVQ 248

Query: 193 LISDVMAGTERLLTQLCAKLKTHEMGARIFVITLRRVDLDQQEVELRLARALRDPQRILP 252
               ++    RL   L A L   + G + F + L    L    +++ L  A RDP  +  
Sbjct: 249 SHQALLFPLRRLTGDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAERDPAMLFE 308

Query: 253 LFEKELAEIDAGFGIDQLRLEATQTEALPT--QQMSHVAGDGDDR---LEDLITRIGTRI 307
           L    L ++     +   RL A   E LPT   Q   +  D   +    E L  R+  R+
Sbjct: 309 LARGRLEQVQVEAPVRGFRLRA---EDLPTFVPQYQELFDDRPQQSLPWEQLRERLRARL 365

Query: 308 GLENIQRFLPADSHIPERSFIVAPAAYSATASGWTCKTPRPLCLFPPEPIPGSGPYPPNH 367
           G + +Q       H PE        A+  +    TC+      + P    PG     P  
Sbjct: 366 GDDAVQGLRFQADHRPE-------CAWQTSVDNQTCE------VLPAVQRPGWLLTEPQA 412

Query: 368 FRWRRVSLTTGHTIGPERITPEWWLEDDNWRSGMRDYWRVETTQGRRLWLFYTPQNPG-W 426
                   +T   +GPERI   WW  DD      RDY+ +ET  G++ W +      G  
Sbjct: 413 VH----EGSTRILMGPERIESGWWDGDD----VRRDYYLIETRSGQQGWAYRAVGEGGPL 464

Query: 427 FVQGEFA 433
           ++QG FA
Sbjct: 465 WLQGWFA 471