Pairwise Alignments

Query, 433 a.a., Error-prone polymerase for DNA repair (imuB or polY like) (from data) from Phaeobacter inhibens DSM 17395

Subject, 470 a.a., DNA polymerase Y family protein from Pseudomonas fluorescens SBW25-INTG

 Score =  118 bits (295), Expect = 4e-31
 Identities = 117/430 (27%), Positives = 173/430 (40%), Gaps = 48/430 (11%)

Query: 18  ADIYRDQQFLLILRRWATRYCPWVGLEGRDGLVLDISGSSHLFGGETGMLNAIRNGLMRV 77
           A+I R QQFL     WA ++   V L     L+ +I  S  LFG        +R  L  +
Sbjct: 75  AEIERHQQFLAA---WAYQFSSQVSLYYPRALLFEIESSLGLFGPWPQFEARLRKELAEL 131

Query: 78  GLSAQIGLADTRGAAWALAHYGEGQAATGD-MLPALQHLPVAALRLDEKTTTALIRLGLR 136
           G   +I  A    AA ALA+  +G A   D ++ AL  LP+    LD +  TAL R+GLR
Sbjct: 132 GFRHRIVAAPNPAAARALANIEDGLAVQDDGLMQALGPLPIDRAGLDPQAATALSRMGLR 191

Query: 137 KIGDLATTPRAPLARRFGANVLMRLDQALGHQAEEITPLTAPPHYGVRMTLPEPIGLISD 196
            +  +   PR  LARRF A++L  LD   G +   +     P  + VR+ L   +     
Sbjct: 192 TLAQVQALPRHTLARRFDASLLKHLDALSGQRPLALAFYQPPDRFDVRIELNFDVQSHQA 251

Query: 197 VMAGTERLLTQLCAKLKTHEMGARIFVITLRRVDLDQQEVELRLARALRDPQRILPLFEK 256
           ++    RL   L A L   + G + F + L         +++ L  A R+P  +  L   
Sbjct: 252 LLFPLRRLTGDLSAFLCGRDSGVQRFDLHLEHAQATDTVIKVGLLSAEREPAMLFELARG 311

Query: 257 ELAEIDAGFGIDQLRLEATQTEALPTQQMSHVAGDGDDRLE------DLITRIGTRIGLE 310
            L  +     +  +RL A        Q+        DDR +       L  R+  R+G E
Sbjct: 312 RLEHVQVTSPVRGVRLVAQDLPVFVPQRQDLF----DDRPQQTLPWAQLRERLRARLGDE 367

Query: 311 NIQRFLPADSHIPERSFIVA------PAAYSATASGWTCKTPRPLCLFPPEPIPGSGPYP 364
            +Q       H PE ++  A      P   +    GW   TP  L       +       
Sbjct: 368 AVQGLRFHADHRPECAWQAATDKHPCPPLNNVHRPGWLLSTPTLLAEHGVHIL------- 420

Query: 365 PNHFRWRRVSLTTGHTIGPERITPEWWLEDDNWRSGMRDYWRVETTQGRRLWLFYT-PQN 423
                           +GPERI   WW    +     RDY+ ++T  G++ W + T  QN
Sbjct: 421 ----------------MGPERIESGWW----DGADVRRDYYLIQTRAGQQGWAYRTVGQN 460

Query: 424 PGWFVQGEFA 433
            G ++QG FA
Sbjct: 461 DGLWLQGWFA 470