Pairwise Alignments

Query, 217 a.a., ribosomal large subunit pseudouridine synthase A from Phaeobacter inhibens DSM 17395

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 5e-53
 Identities = 97/203 (47%), Positives = 131/203 (64%), Gaps = 2/203 (0%)

Query: 5   SDYTPPMDP-LDILHHDAQLLVVNKPHGLLSVPGRGEHLADCLLSRLQAAFPEALLVHRL 63
           ++Y PP DP +D+++ D  ++  NKP GLLSVPGR     D + +RL    P+  +VHRL
Sbjct: 4   TEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRL 63

Query: 64  DRDTSGVMVFGVTPHAQRHLSMQFEKRSAKKAYVARLDGRLEPRSGTVDLPLIVDWPNRP 123
           D  TSG+++F    H +  L  QF+ R   K Y AR+ G +E   G V+LPL  DWPNRP
Sbjct: 64  DMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRP 123

Query: 124 RQMVCHDTGKEAVTDWRVMKYEDTATRVRLTPKTGRSHQLRVHMLSLGHAILGDPLYAEG 183
           +Q VC + G++++T ++V+K E+  T VRL P TGRSHQLRVHM SLGH I+GD LYA  
Sbjct: 124 KQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPP 183

Query: 184 RALDH-PRMMLHAEELRIKHPDS 205
            A++   R+ LHA EL   HP S
Sbjct: 184 EAVEFADRLQLHAAELCFYHPRS 206