Pairwise Alignments

Query, 409 a.a., RmuC DNA recombination family protein from Phaeobacter inhibens DSM 17395

Subject, 492 a.a., recombinase RmuC from Pseudomonas fluorescens FW300-N2E3

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 90/345 (26%), Positives = 161/345 (46%), Gaps = 27/345 (7%)

Query: 34  RANARAVQSIAPIAQQMAHLGQSVQQLRGGVQHVSDAQANAQVQMIQTVETRLSAVQQQV 93
           R +A+A    A + +Q     Q +  L+G    +    A    ++    E R +   QQ 
Sbjct: 116 RLDAQAASLNAELREQQESHQQRLSDLQGSRDELRAQFAELAGKIFDEREQRFAETSQQR 175

Query: 94  NDRLSDNALRQARALADMQERLQESLHGSTKRTVTSLTQLQERLAVIDKAQDNITKLSGD 153
             +L D    + ++    ++R++ES     +    SL +  ERL  ++       +LS +
Sbjct: 176 LGQLLDPLKERIQSF---EKRVEESYQAEARERF-SLAKELERLQQLN------LRLSDE 225

Query: 154 VLGLQDILANKQTRGAFGEIQLNDIVSKALPADSYAFQHTLS----NGKR--ADCLIYLP 207
              L   L  ++T+G +GE+ L  ++  A       +Q  +S    +G+R   D LIYLP
Sbjct: 226 ATNLTRALKGQKTQGNWGELILERVLEHAGLEKGREYQTQVSLKGPDGERFQPDVLIYLP 285

Query: 208 NPPGPIVIDSKFPLEPYEALRNADTQEQRASAARQLKAALRAHIRAISEKYI--LDG-ET 264
                +V+DSK  L  Y+    AD      +A +Q   +LR H++ +S+K    LDG  +
Sbjct: 286 GDK-QVVVDSKVSLTAYQQYVAADDDAIGQAALKQHVLSLRNHVKGLSDKDYKRLDGLHS 344

Query: 265 ADGALMFLPSEAVYAELHANFSDIVREGFSAKVWIVSPTTCMATLNTMRAILKDAR---- 320
            D  L+F+P EA ++       ++ +E F   + IVSPTT +ATL  + ++ K  R    
Sbjct: 345 LDFVLLFVPIEAAFSAALQAEPNLFQEAFDRHIVIVSPTTLLATLRVIDSLWKQERQSQN 404

Query: 321 ---MREQAGAIRSELAHLHKDVERLGDRVGNLDRHFGMAAKDIAE 362
              + E+AG +  +     +D++ +G+R+  LD+ +  A   + E
Sbjct: 405 AREIAERAGWLYDKFVLFIQDLDEVGNRLQQLDKAYSAARNKLTE 449