Pairwise Alignments

Query, 409 a.a., RmuC DNA recombination family protein from Phaeobacter inhibens DSM 17395

Subject, 521 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 83/345 (24%), Positives = 157/345 (45%), Gaps = 34/345 (9%)

Query: 64  VQHVSDAQANAQVQMIQTVE-------TRLSAVQQQVNDRLSDNALRQ-ARALADMQERL 115
           +Q  +DAQ +A  + I T+E       T+   +  ++ +  S++   Q A  L  +   L
Sbjct: 129 IQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQLEGVLGPL 188

Query: 116 QESLHGSTKRTVTSLTQLQERLAVIDKAQDNIT----KLSGDVLGLQDILA--NKQTRGA 169
           ++ L G  ++   S    Q   + +    +++     K+S D + L   L   NKQ +G 
Sbjct: 189 KQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKGDNKQ-QGN 247

Query: 170 FGEIQLNDIVSKALPADSYAFQHTLSN-----GKR--ADCLIYLPNPPGPIVIDSKFPLE 222
           +GE+ L+ ++ ++   + + + HT  +     GKR   D +++LP     +VID+K  L 
Sbjct: 248 WGEVILDRVLQESGLREGHEY-HTQQDLKDDSGKRFKPDVIVHLPENKD-VVIDAKMSLI 305

Query: 223 PYEALRNADTQEQRASAARQLKAALRAHIRAISEKYI--LDG-ETADGALMFLPSEAVYA 279
            YE   N++    R  A  +   ++R HI+ +S+K    L G ++ D  LMF+P E  + 
Sbjct: 306 SYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFL 365

Query: 280 ELHANFSDIVREGFSAKVWIVSPTTCMATLNTMRAILK-------DARMREQAGAIRSEL 332
               +   +V       + +VSPT  +  L T+  I +          + +QAG I  +L
Sbjct: 366 LALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIYDKL 425

Query: 333 AHLHKDVERLGDRVGNLDRHFGMAAKDIAEIKISADKAGRRAQRL 377
                D+E+LG  + N ++ +  A   ++  K +  +     Q+L
Sbjct: 426 CGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQL 470



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 35/203 (17%)

Query: 83  ETRLSAVQQQVNDRLSDNALRQ--------------ARALADMQERLQESLHGSTKRTVT 128
           +  LS  QQQV     DN LRQ              A A+A+    +++ L  S +R + 
Sbjct: 55  DAELSLAQQQVLVDDKDNQLRQCQQRLEQKIEQLGKAEAMAERLPSIEQQLADSHRRQL- 113

Query: 129 SLTQLQERLAVIDKAQDNI-TKLSGDVLGLQDILANKQTRGAFGEIQLNDIVSKALPADS 187
              +LQ  L+  +  Q  I  K       +Q+ +A  +      + Q  ++ ++     S
Sbjct: 114 ---ELQLALSKSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERS 170

Query: 188 YAFQHTLSNGKRADCLIYLPNPPGPIVIDSKFPLEPY-EALRNADTQEQRASAARQLKAA 246
            +F+H  +N         L    GP+    K  LE + + +R +   EQ   +A  LK  
Sbjct: 171 ESFKHQNAN--------QLEGVLGPL----KQQLEGFRQQIRESYNHEQSERSA--LKHQ 216

Query: 247 LRAHIRAISEKYILDGETADGAL 269
           L  H+R ++ K   D      AL
Sbjct: 217 LE-HLRELNLKMSQDAINLTKAL 238