Pairwise Alignments

Query, 1127 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

Subject, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

 Score =  949 bits (2454), Expect = 0.0
 Identities = 525/1152 (45%), Positives = 701/1152 (60%), Gaps = 94/1152 (8%)

Query: 28   YAELCVTTNFTFLTGASHPEELIVRAAELGLSALAITDHNSLAGVVRAWSALKELKRDPQ 87
            + EL   TNF+FL GA+  EE++V A + GL+ L I D NS+AGVVRA +  K       
Sbjct: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKV------ 60

Query: 88   DALKIRSQHQVDSSSRQEIGHTSALPKPTTPIFPKLIVGCRLILQNCAVDWIALPCDRSA 147
                                          P  P    G RL+  +   D +A P +R  
Sbjct: 61   ---------------------------EGYPFQP----GARLVFADGTPDILAYPKNRRG 89

Query: 148  YKRLARLLTLGKRRAEKGQCLLYAEDMIDACKGMILIALPKETLSNAVSDIQKIG---RQ 204
            +  L RLL+ G  R++KG C L+  D+++  + ++LI +  E      S    +G     
Sbjct: 90   WGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLLIVMQGEGRPEPESLEVLLGTLKEH 149

Query: 205  FPNHVFLGATPRYDGSDQAYLAACAKLAQTTCAPMVAVGDVLMHRANRRQLADVLTCMRE 264
              N ++LG  P YDG D+   A  A +A+     ++A  D L H  + R LADV+T +RE
Sbjct: 150  AGNRLYLGLAPHYDGFDRHDFAVLAAIARKAGIGLLATNDALYHDPHYRPLADVVTSIRE 209

Query: 265  NINIDDIGTRALPNAERRLKAGADMARIFRDHPAALRRTAEIANRCNFDLSELSYEYPHE 324
            ++ I   G     NAER LK   +MAR+F D+P A+  T +      F L ELS++YP E
Sbjct: 210  HVPIAGAGFLLQKNAERHLKGPREMARLFSDYPEAIANTRKFFRELAFSLDELSHQYPDE 269

Query: 325  EAEGETPQDRLERLAREGLKRRYPDGPPDRAIKLMEKELSAVKDLEFPAYFLTVHDIVQF 384
             A+GETP + L RL  EG   RYP+G P++ ++ ++ EL  + D ++  YFLTVH +V+F
Sbjct: 270  NADGETPAESLRRLVAEGAAERYPEGVPEKVMRQIDYELELIHDKKYEPYFLTVHKLVKF 329

Query: 385  ARSKGILCQGRGSAANSILCYLLGITDVSPDMIAMVFERFVSKHRGEPPDIDVDFEHERR 444
            ARS  ILCQGRGSAANS +C+ LGITDV P    ++F+RF+SK R EPPDIDVDFEHERR
Sbjct: 330  ARSVNILCQGRGSAANSSVCFCLGITDVDPQKFTLLFDRFLSKDRDEPPDIDVDFEHERR 389

Query: 445  EEVIQWIYQKYGRHRAGLCATVIHFRTRAAIREVGKVMGLSQDVTAGLSGQIWGMSNGSV 504
            EEVIQ+IY+ YG+  AGL A VI +R+R+A REV K  GLS+DV + L   IWG      
Sbjct: 390  EEVIQYIYRTYGKEHAGLTAAVISYRSRSAGREVAKAFGLSEDVQSALVSSIWGWGTSPF 449

Query: 505  DLERIRELGLNLEDRRLMQTIRLIGEIIGFPRHLSQHVGGFVITSGRLDELAPIENAAME 564
              E+ +  GL+  D    + +     ++ FPRHLSQHVGGFVIT  RLDE+ PI N AM 
Sbjct: 450  TEEQAKGAGLDAADPLTRRVLAYASLLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMP 509

Query: 565  NRTVICWDKDDIDALRILKVDILALGMLTCIRKAFALMQQHENITHSIATIPQKD-EATY 623
            +R +I WDKDD+D L+ILKVD+LALGMLTC+ K F L++ H     ++A I Q   +A Y
Sbjct: 510  DRYMIEWDKDDLDELKILKVDVLALGMLTCLAKGFKLLEAHYGEPITLAEIYQDHRDAVY 569

Query: 624  DMLCAADAVGVFQVESRAQMNFLPRMRPREFYDLVIEVAIVRPGPIQGDMVRPYIRRRNG 683
            DM+C AD VGVFQ+ESRAQM+ LPR++PRE YDLVIEVAIVRPGPIQG+MV PY++RR  
Sbjct: 570  DMICRADTVGVFQIESRAQMSMLPRLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREA 629

Query: 684  LEKPDPF---GPQLEQVTRRTKGVPLFQEQALQIAVVGAGFSAEEADHLRRSLASFRRMG 740
              + +      P+L+ V  RT GVPLFQEQA+QIA+  AGFS  EAD LRR++A+F+R G
Sbjct: 630  QRRGEAVVYPSPELKAVLERTLGVPLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTG 689

Query: 741  TISKYRDKFIAGMLKNKYSREIAERCFGQIEGFADYGFPESHAAAFAMLAYVSAWLKCHH 800
            TI  +  K + GM+ N Y RE AERCF QI+GF +YGFPESHAA+FA L Y SAWLK ++
Sbjct: 690  TIHTFERKMVEGMVANDYEREFAERCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYY 749

Query: 801  PAIFACALLNSQPMGFYAPAQIVRDVRDHGIEVRPICVNQSQWDNSLERRPDGTL----- 855
            P IF  ALLN+QPMGFYAPAQ+VRD R+HG+ + P+ +N S WD  LE   +G       
Sbjct: 750  PDIFCAALLNAQPMGFYAPAQLVRDAREHGVRMLPVDINHSDWDALLE--GEGAFDKNAV 807

Query: 856  ---------------ALRLGFRQIKGFKEDDTGWIIAARGNGYIDPEHLWLRAGLAPAAL 900
                           A+RLGFR +KG K+ D   ++A RG GY     LWLR+GL+ + L
Sbjct: 808  HPRHASMREVIKTRKAVRLGFRLVKGLKQTDMKALVARRGEGYRSVHDLWLRSGLSRSVL 867

Query: 901  ERLAEADAFSSMGISRRDALWQVKSITTPAP---LPLFNDQLDGEAINEPNVMLPRMHLG 957
            ERLA+ADAF S+G+ RR ALW VK++   +    LPLF      +   EP V LP M  G
Sbjct: 868  ERLADADAFRSIGLDRRAALWAVKALDEQSAVERLPLFEGAGSDDLQIEPKVALPDMPAG 927

Query: 958  EEVVEDYVSMRLSLRAHPMELLRPTLPG---LTCNDQLIKAPLQRVSVGGLVITRQRPGT 1014
            E+V+ DY ++ LSL+AHP+  +R        L   D    A  + V+V GLV+ RQRPG+
Sbjct: 928  EQVIHDYRTLTLSLKAHPVSFMREDFSRRGILRSRDLAATATGRWVTVAGLVLVRQRPGS 987

Query: 1015 ASGVIFLTLEDETGVCNVVVWKKIYERFRRIVMGGRLLCVTGYLQREGTIVHVIAQHIED 1074
            A+GVIF+T+EDETG+ N++VW+K ++++RR VMG RL+ V G LQ +  ++HV+A H+ED
Sbjct: 988  ANGVIFMTIEDETGIANIIVWEKTFQKYRRQVMGSRLVKVRGRLQNQSGVIHVVADHLED 1047

Query: 1075 ---------ESARLSELGHPLDGAIQSEGPRADDTPK------RTRYPARAMHPRDQAKR 1119
                       AR   +    DGA++   P AD   K      R   PARA    + A +
Sbjct: 1048 ITPMLGLLRREARRFGVNDRADGALR---PSADAREKKKLRQLRLGLPARAAPEGEAAAQ 1104

Query: 1120 LF----PSRDFH 1127
            +       R+FH
Sbjct: 1105 VAEVMPKGRNFH 1116