Pairwise Alignments

Query, 378 a.a., DNA polymerase IV from Phaeobacter inhibens DSM 17395

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  213 bits (543), Expect = 5e-60
 Identities = 140/352 (39%), Positives = 196/352 (55%), Gaps = 13/352 (3%)

Query: 1   MDCDAFYASVEKRDNPDLADKPVVIGGGQ-RGVVSTACYVARIRGVRSAMPMFQALKLCP 59
           +D DAFYASVE+RDNP+L  KPV +G  + RGVV+ A Y AR  GV SAMP   A + CP
Sbjct: 22  IDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKRKCP 81

Query: 60  DAVVIKPRMNVYVDVSRQIRAMMDELTPDVEPLSLDEAFMDLSGTQRLHGAPPAVMLARL 119
           + + +  R +VY  VSRQI+A+  E TP VEPLSLDEA++D+  T+   G   A  +A  
Sbjct: 82  ELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDV--TENFRGLKLATEIAEE 139

Query: 120 VK-RMKDELGVTGSIGLSHNKFLAKVASDLDKPRGFSVIGAAETSEFLKDKPVRLIWGIG 178
           ++ R++ E  +T S G+S+NKFLAK+ASD  KP G  VI      +F++  PV+   G+G
Sbjct: 140 IRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFHGVG 199

Query: 179 PAAQASLDKAGIRSFSDLLRWDRTDLNARFGSMGERLWHLARGQDRRRVSSNAPIKSISN 238
           PA    + + GI + +DL   D   L   FG  G   + +ARG D R+V  +   KSI  
Sbjct: 200 PATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKSIGA 259

Query: 239 ETTFFEDTASLEVLDGHLWRLAEKVSDRAKARQLAGRVVTLKLKRANHSSLTRRQSLRDA 298
           E TF ED   LE     L  L +KV    +A  + G+ +TLK+K A+ + +TR +++   
Sbjct: 260 EDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTIVAP 319

Query: 299 TQIADTVYRTARALLDQV--GDEGPYRLLGCGISDLVPETQADITGDLLDPQ 348
                 +   A  LL  +    +G  RLLG  +S L      D   D  +PQ
Sbjct: 320 IASVAEMSEIAELLLSPIFPAPKG-IRLLGVTLSSL------DTVDDRSEPQ 364