Pairwise Alignments

Query, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

Subject, 857 a.a., ATPase (RefSeq) from Shewanella loihica PV-4

 Score =  943 bits (2437), Expect = 0.0
 Identities = 473/848 (55%), Positives = 631/848 (74%), Gaps = 1/848 (0%)

Query: 28  MDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRAGGTPEQV 87
           M L++ T + +  +  AQ++A   DHQ + P HL+ AL++ D G    L+T+AG +   +
Sbjct: 1   MRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDGGSIHPLLTQAGISVSTL 60

Query: 88  VQALELAVSKLPRVQGNSADIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCMVKS 147
             AL   + +LP+++G   D+ L     ++L+   K+A+K  D ++  E  ++A      
Sbjct: 61  RSALSQELERLPQIEGTGGDVQLSQALIRLLNLCDKLAQKRKDKYISSELFVLAALEGSD 120

Query: 148 KAKDALADGNVSAQALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRDGKIDPI 207
                L     + + L + + ++R G+  D  +AED   ALKK+  DLTE    GK+DP+
Sbjct: 121 ALAQCLKKSGATKELLEKTIEEVRLGKNIDDPNAEDQRQALKKFTVDLTERAEQGKLDPV 180

Query: 208 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRDKQLLSL 267
           IGRD+EIRR +QVL RR+KNNPVLIGEPGVGKTAI EG+A RI+NG+VPE +++K++LSL
Sbjct: 181 IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSL 240

Query: 268 DMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIK 327
           D+GAL+AGAKYRGEFEERLKAVL E+ +  G++ILFIDE+HT+VGAGKSDGAMDA N++K
Sbjct: 241 DLGALVAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLK 300

Query: 328 PALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELH 387
           PALARG+LHC+GATTLDEYR+Y+EKDAAL RRFQ V+V EP+VEDTI+ILRG+KE+YELH
Sbjct: 301 PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH 360

Query: 388 HGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDALDRQIL 447
           H V I D A+V+AA++SHRYI+DR LPDKAIDL+DEAA+ +RMQ+DSKPE LD L+R+ +
Sbjct: 361 HHVEITDPAIVAAASMSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLERRTI 420

Query: 448 QMQIEEEALKLEDDAASKDRLETLQKELAELQEKSAEMTAQWQSERDKLASARGLKEQLD 507
           Q+++EE+AL  E D AS  RL TL+ ELAE++ K+AE+   W +E+  LA  + +K  L+
Sbjct: 421 QLKLEEQALSKESDEASLRRLSTLRSELAEVEAKAAELNEVWHTEKAALAGTQHIKADLE 480

Query: 508 RARADLDAAKREGNLARAGELSYGVIPGLEKQLS-EAEASERNGLMVEEAVRPEQIAGVV 566
           +AR DL+ A+R G+L R  EL YG IP LEKQL   A+A  ++  ++   V   +IA V+
Sbjct: 481 QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLAAQAEMQDMTLLRNKVSDVEIAEVL 540

Query: 567 ERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDENRPLGS 626
            + TGIP SKMLEGE+EKLL ME  LH RVIGQ+ AV AV+NA+RR+RAGL D NRP+GS
Sbjct: 541 SKATGIPVSKMLEGEKEKLLHMEEALHTRVIGQNEAVDAVANAIRRSRAGLADPNRPIGS 600

Query: 627 FLFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVGYDEGG 686
           FLFLGPTGVGKTEL K++A FLFD ++AMVR+DMSEFMEKH+V+RL+GAPPGYVGY+EGG
Sbjct: 601 FLFLGPTGVGKTELCKSLAKFLFDTEAAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660

Query: 687 VLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIILTSNL 746
            LTEAVRRKPY VIL DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ +++I+TSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNL 720

Query: 747 GAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDGIVTLQLA 806
           G+  + +    A  A+ K +VM+ V   FRPEFLNR+DE+++F  L  + +  I  +Q+ 
Sbjct: 721 GSDVIQERFGIASYAEMKSEVMNVVTHSFRPEFLNRIDESVVFHPLESEHIAHIAQIQID 780

Query: 807 RLEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEMLLAGEIRD 866
            L+ RL  +   LE+ D A   +A  G+DPV+GARPLKR +Q+ ++NPLA+ LL+GE+  
Sbjct: 781 NLKARLAEKDFELEVSDDALALIAQAGFDPVYGARPLKRALQQEVENPLAQKLLSGELLP 840

Query: 867 GDTVPVSA 874
           G  + V A
Sbjct: 841 GAPIKVDA 848