Pairwise Alignments

Query, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

Subject, 862 a.a., ATP-dependent chaperone ClpB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  944 bits (2441), Expect = 0.0
 Identities = 485/860 (56%), Positives = 634/860 (73%), Gaps = 9/860 (1%)

Query: 28  MDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRAGGTPEQV 87
           MD+NKFTE+++  +  AQ+ A R  HQ++  EH   AL+  +QGL   L+ RAG  P+  
Sbjct: 1   MDINKFTEKSQQAIAEAQSTAVRLGHQQVDVEHAALALVRQEQGLVPRLLERAGYKPDAF 60

Query: 88  VQALELAVSKLPRVQGNSA---DIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCM 144
             ALE A+ K P V G  A    IY+  +  + L  A   A++  D +V VE L+ A  +
Sbjct: 61  AGALEAALQKRPAVSGPGAAQGQIYVTQRLNQALVRAQDFAKRLKDEYVSVEHLICAF-L 119

Query: 145 VKSKAKD---ALADGNVSAQALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRD 201
            +  + D      +  ++   L   + D+R  ++  S + ED Y+AL+KY RDL E  R 
Sbjct: 120 EEPPSTDMGRVAREFGLTQDKLLAVLEDVRGAQRVTSQNPEDTYEALQKYGRDLVEEARK 179

Query: 202 GKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRD 261
           GK+DP+IGRD EIRR +++LSRRTKNNPVLIGE GVGKTAI EG+A RI+ GDVPE L++
Sbjct: 180 GKLDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKN 239

Query: 262 KQLLSLDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMD 321
           + L +LDMGALIAGAKYRGEFEERLKAVL EV +A G I++FIDE+HT+VGAGK+DGAMD
Sbjct: 240 RSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRIVMFIDELHTIVGAGKTDGAMD 299

Query: 322 AANLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIK 381
           A NL+KP LARGELHCIGATTLDEYRKY+EKD AL RRFQPV+V EPTVEDTISILRG++
Sbjct: 300 AGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVVVDEPTVEDTISILRGLR 359

Query: 382 EKYELHHGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDA 441
           E++E+HHGVRI+D+A+V A TLSHRYITDR LPDKAIDL+DEAAA +R ++DS P ELD 
Sbjct: 360 ERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPAELDE 419

Query: 442 LDRQILQMQIEEEALKLEDDAASKDRLETLQKELAELQEKSAEMTAQWQSERDKLASARG 501
           ++R+++Q++IE EAL+ E DAAS++RLE L+ ELA+L+   A + AQW+ E+  + + R 
Sbjct: 420 VNRKVMQLEIEREALRRETDAASRERLEKLENELADLRASQATLLAQWEREKGSIDAVRT 479

Query: 502 LKEQLDRARADLDAAKREGNLARAGELSYGVIPGLEKQLSEAEASERNGLMVEEAVRPEQ 561
           +KE+++R R  +D A+R  +L RA EL Y  +  LE++L+ AE  +    +++E VRP+ 
Sbjct: 480 IKEEIERTRLAIDEAERNYDLNRAAELKYSKLLELERKLAAAERGDDENRLLKEEVRPDD 539

Query: 562 IAGVVERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDEN 621
           +A +V RWTGIP +++LE EREKLLR+   LH RV+GQD AV AV+ AV RARAGL+D  
Sbjct: 540 VAEIVARWTGIPVTRLLESEREKLLRLGDVLHERVVGQDEAVQAVAEAVLRARAGLSDPG 599

Query: 622 RPLGSFLFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVG 681
           RP+GSF+FLGPTGVGKTEL K +A+ LFD +  +VR+DMSE+MEKHAVARLIGAPPGYVG
Sbjct: 600 RPIGSFIFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEYMEKHAVARLIGAPPGYVG 659

Query: 682 YDEGGVLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLII 741
           YDEGG LTEAVRRKPY V+LFDE+EKAH DVFNVLLQ+LDDG LTD  GRTVDFK T+II
Sbjct: 660 YDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDGRLTDSHGRTVDFKNTIII 719

Query: 742 LTSNLG-AQALSQLPDGADAADAKRD-VMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDG 799
           +TSN+G +  L  + D  +     RD VMD +R HFRPEFLNR+DE ++F  L  + +  
Sbjct: 720 MTSNIGSSHLLDGITDEGEFRPGVRDRVMDEMRRHFRPEFLNRVDEIVMFRPLLPEQIGR 779

Query: 800 IVTLQLARLEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEML 859
           IV L L +L  RL  RKIT++L D A+ ++A+  YDPV+GARPL+R +Q  ++ PLA  L
Sbjct: 780 IVELLLGKLRGRLAERKITVDLSDAARDFIAESAYDPVYGARPLRRYLQTNVETPLARRL 839

Query: 860 LAGEIRDGDTVPVSAGAEGL 879
           +AG+++DG  V +    + L
Sbjct: 840 IAGDLKDGQHVTIGVRVDKL 859