Pairwise Alignments

Query, 210 a.a., conserved hypothetical integral membrane protein from Phaeobacter inhibens DSM 17395

Subject, 222 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 3e-30
 Identities = 73/204 (35%), Positives = 108/204 (52%), Gaps = 36/204 (17%)

Query: 14  AIVVASNILVQF---LFGQWLTWGAFTYPIAFLVTDVTNRVYGTGPARKVVLAGFVVGVI 70
           AI+ ASN LVQ    LFG   TWGAF++P  +L TD+T R++G   ARK++L   +  ++
Sbjct: 22  AIITASNYLVQLPFQLFGFHTTWGAFSFPFVYLATDLTVRIFGQQSARKIILRAMIPALL 81

Query: 71  CSLI-----------GTQIMGEFGPLVTLRIAIASGLAFLTAQLLDVSIFAALRNG-AWW 118
            S +           G   + +F   V  RIA AS  A+L  QL+D+++FA LR   AWW
Sbjct: 82  ISYLIGVLFHQGSFQGGDALAQFNNFV-FRIAFASFAAYLVGQLMDITVFARLRQAKAWW 140

Query: 119 RAPLASTLIGASVDTALFFSIAFSGALVWLEPGNNVSWAAEMLPVLGTGPEAPLWVSLAV 178
            AP AST+IG  +DT +FFS+AF                A   P +     A  W+ +A 
Sbjct: 141 VAPAASTVIGNLIDTLVFFSVAF---------------YASSDPFM-----AEHWMEIAS 180

Query: 179 ADWGVKIGLALLALIPFRLIVTRL 202
            D+G K+ ++L   +P   ++ R+
Sbjct: 181 VDYGFKLIVSLGLFLPAYGVLLRV 204