Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 807 a.a., Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C from Xanthomonas campestris pv. campestris strain 8004

 Score =  410 bits (1054), Expect = e-118
 Identities = 254/573 (44%), Positives = 328/573 (57%), Gaps = 23/573 (4%)

Query: 4   LCAAVVIGVVAFNAWVEKTPMPATLAETATELRDRNGQLLRAYPVADGIWRMATTVDQVD 63
           L +AV++  +AF       P+P +  +T+T +  R+G  LRA+  A G+WR   T   V 
Sbjct: 43  LLSAVLLLDLAF-----PLPLPKS-RDTSTLVVARDGTPLRAFADAQGVWRYPATPQSVS 96

Query: 64  AGYRAMLLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDGSTG 123
             Y   LL YED+ F+ H GV+   LLRA  Q +  GR+VSGGSTL+MQVAR+L+  +  
Sbjct: 97  PLYLQALLNYEDRWFWHHPGVNPWGLLRAGEQWIGSGRIVSGGSTLTMQVARILDPHTRT 156

Query: 124 RWAGKLRQIRLALALERRLSKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPSRLTPAE 183
            W GK +Q+  AL LE  LSK QIL LYL  AP+GG IEGV AAS+A+ GK  + L+ AE
Sbjct: 157 PW-GKAKQLLRALQLEAHLSKQQILALYLERAPYGGTIEGVEAASWAYLGKPATALSQAE 215

Query: 184 AALLVALPQAPEARRPDRMPEDARRARNRVLQRMRNAGVLAADAAETAAQAPMPRGMRVF 243
           AALL  LPQ+P   RPD  PE A+RAR++VL RM   GV +    + A   P+       
Sbjct: 216 AALLAVLPQSPSRLRPDSHPEAAQRARDKVLDRMVELGVWSRAQVDDARFEPVVTRSLKP 275

Query: 244 PQLAPHLADYLVAETPEQARIDLTLEAGLQQRLAQLLTESVARQDARLSAAVLVADHQSG 303
           P  A  LA  L +  P  ARI  TL+  LQ+ L + +    ++   R SAA+LV D+ S 
Sbjct: 276 PLHAALLAQRLHSAQPRAARIVTTLDVELQRTLEERVATYFSQLPERTSAALLVVDNASM 335

Query: 304 EILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGLAFDQGLAHPETLIHDGPIDI 363
           E  A VGS+ + D  R G VDM +A RSPGSTLKP +YG+A D G+ H E+L+ D P   
Sbjct: 336 EARAYVGSASFGDRKRLGHVDMVQAWRSPGSTLKPFLYGMALDDGVIHSESLLVDAPQSF 395

Query: 364 DGYAPQNFDGRFRGDLRIRRALQLSLNTPVIQLTQALGPARLMSALRRGGARPRLP-GGK 422
             Y P NFD  F G +    AL+LSLN P + L   +GPAR  + L   G   R   G  
Sbjct: 396 GNYRPGNFDAAFNGPVAAATALRLSLNVPAVDLLDRIGPARFAARLSNAGIALRFAHGST 455

Query: 423 PGLAVALGGVGVSLRDLVQVYAGLGAGGQGPRLRARLQAP-YERMPRLMSKVSAWQIGDI 481
           P LA+ LGG G  L++LV  +A L  GG    +R     P  +R  RLMS  +AW + +I
Sbjct: 456 PNLALILGGTGAQLQELVGAFAALQRGGIAGHVRYTPDDPRIDR--RLMSPGAAWIVREI 513

Query: 482 LRGVPPPAGAPAGM-------VAYKTGTSYGHRDTWAIGWDGRYVVGVWLGRADGTPVPG 534
           L+  P P  A           VA+KTGTSYG+RD WAIG   RY VGVW+GR DGTP+PG
Sbjct: 514 LQSNPRPGYASGTFDTTARPGVAWKTGTSYGYRDAWAIGGTRRYTVGVWVGRPDGTPLPG 573

Query: 535 AFGAELAAPLLFEAFGRIGRGF-----TPFPAS 562
            +GA  A PL+FE    + R        P PAS
Sbjct: 574 QYGAVTALPLMFEVIDALPRAAGDSAPMPMPAS 606