Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  205 bits (522), Expect = 5e-57
 Identities = 182/585 (31%), Positives = 256/585 (43%), Gaps = 51/585 (8%)

Query: 61  QVDAGYRAMLLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDG 120
           Q+    R   L  ED+RFY+HSG+D+  + RA+   L  G+V  G ST++ Q+AR++   
Sbjct: 55  QIPLRLRQAFLAAEDRRFYEHSGIDLFGIARASVTNLLSGQVQEGASTITQQLARIVFLS 114

Query: 121 STGRWAGKLRQIRLALALERRLSKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPSRLT 180
                  KL +  +A  LE+ L+K QILE YL     G    GV  A++ +F K    L+
Sbjct: 115 QERSLQRKLNEALMAQKLEQELTKDQILEQYLNLVYLGAGAYGVADAAWTYFSKPVQDLS 174

Query: 181 PAEAALLVALPQAPEARRPDRMPEDARRARNRVLQRMRNAGVLAADAAETAAQAPM---P 237
             E A L  LP AP A  P    E A+  RN VL RM+  G +    AE A + P+   P
Sbjct: 175 LGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVLSRMQEVGFITPSEAEAARREPLALKP 234

Query: 238 RGMRVFPQLAPHLADYLVAETPEQARID------LTLEAGLQQRLAQLLTESVARQD-AR 290
              +    LAP+  DY+  E P     D      LTL+  L  R  Q   +++       
Sbjct: 235 AAPKYAQSLAPYFTDYVRQELPRFVAPDVLEYGGLTLKTTLNYRWQQAADQAIQNSTYGS 294

Query: 291 LSAAVLVADHQSGEILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGLAFDQGLA 350
           L  A++  D + G I A VG   +    R  F   T+A R PGST K  VY  A   G++
Sbjct: 295 LQGALVSIDPRDGAIRAMVGGVDFN---RSQFNRATQAYRQPGSTFKMFVYAAAIASGMS 351

Query: 351 HPETLIHDGPIDIDGYAPQNFDGRFRGDLRIRRALQLSLNTPVIQLTQALGPARLMSALR 410
            P  +  D  I++ GY PQNF   F G + + +AL  S+N   I++ + +G   ++   R
Sbjct: 352 -PSQVYLDAAINLGGYKPQNFSRSFSGSISLTQALTNSVNIVAIKVLRDVGIDNVIRVAR 410

Query: 411 RGGARPRLPGGKPGLAVALGGVGVSLRDLVQVYAGLGAGGQ-----------GPRLRARL 459
           + G R  L    P   +ALG   V+L ++   Y  L   G+             R R   
Sbjct: 411 QMGIRADLARYYP---LALGASDVTLLEITSAYGTLANQGKYLTPHPIAEIIDHRGRVLY 467

Query: 460 QAPYERMPRLMSKVSAWQIGDILR-----GVPPPAGAPAGMVAYKTGTSYGHRDTWAIGW 514
           Q    +  + +   SA  +  +L      G    A  P   VA KTGT+   RD W IG+
Sbjct: 468 QDKQIKPVQALDPGSAAIVTSMLERVVTSGTGAAAYLPDRAVAGKTGTTEQARDLWFIGY 527

Query: 515 DGRYVVGVWLGRADGTPVPGAFGAELAAPLLFEAFGRIGRGFTP--FPASPASTLRVATA 572
             + V GVWLG  +  P     G+  AA   +       +   P  FP  P    R    
Sbjct: 528 IPQLVTGVWLGYDNFAPT--GSGSSAAAVAWYRFMVEAIKDLPPEKFPPLPNPDQR---- 581

Query: 573 ELPLPLQRF----DRGGIGGPPGE-----RLQLAFPPDGAALLLA 608
             PL   +F    D GGI   PG       ++LA  P  A  L A
Sbjct: 582 -KPLFKAQFTSGSDLGGIDRGPGRYDYGAGIELADSPSFAGSLPA 625