Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 651 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

 Score =  207 bits (528), Expect = 1e-57
 Identities = 159/511 (31%), Positives = 237/511 (46%), Gaps = 61/511 (11%)

Query: 70  LLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDGSTGRWAGKL 129
           +L  ED+RF+ H G+D++ + RA+   L  GRVV GGSTL+ QVA+ L       +  K+
Sbjct: 149 ILATEDRRFFKHFGLDLVGIARASVVNLRAGRVVQGGSTLTQQVAKNLFLTHDRTFKRKI 208

Query: 130 RQIRLALALERRLSKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPSRLTPAEAALLVA 189
           +++ LAL LE+  +K QIL LYL     G    GV AA+  +F +   ++   +AALL  
Sbjct: 209 QEVLLALWLEQTFTKDQILSLYLNRVYLGAGTHGVDAAARRYFDQPVGQINLYQAALLAG 268

Query: 190 LPQAPEARRPDRMPEDARRARNRVLQRMRNAGVLA---ADAAETAAQAPMPRGMRVFPQL 246
           LP+AP    P   P+ +R    +VLQ M  A ++    A  A   A   +P   R    +
Sbjct: 269 LPKAPSRLNPVTNPDGSRVRTLQVLQNMVEAKMITPALAKQAAALADGAIPGARR--GGM 326

Query: 247 APHLADYLVAETPE-----------QARIDLTLEAGLQQRLAQLLTESVARQDARLSAAV 295
             + AD+++    +           +  +D   +   +  +A LL E  A   A  S A 
Sbjct: 327 GSYFADWILERVDDFAGPRDRDLIVRTTLDPVQQRSAEAAVAGLLAEKGAAMKA--SQAA 384

Query: 296 LVADHQSGEILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGLAFDQGLAHPETL 355
           LVA    G + A VG    RD     F    +A R PGS  KP V+    + GL  P T+
Sbjct: 385 LVALAPDGAVTAMVGG---RDHATSPFNRAAQARRQPGSAFKPFVFLAGLEAGLT-PSTM 440

Query: 356 IHDGPIDIDGYAPQNFDGRFRGDLRIRRALQLSLNTPVIQLTQALGPARLMSALRRGGAR 415
           + D PI ++G++P N+  +++G + + +A   SLNT  +++++  G   ++    R G  
Sbjct: 441 MDDAPITVNGWSPGNYKDKYKGRVSLTQAFAQSLNTVAVRVSETAGRGAVVKVAHRLGVI 500

Query: 416 PRLPGGKPGLAVALGGVGVSLRDLVQVYAGLGAGG------------------------Q 451
             L    P  ++ALG   VS  DL   YA    GG                         
Sbjct: 501 GSL---SPLPSIALGVFEVSPLDLTAAYAPFANGGYAVVPHGILSIADRDGGLLYERQDS 557

Query: 452 GPRLRARLQAP--YERMPRLMSKVSAWQIGDILRGVPPPAGAPAGMVAYKTGTSYGHRDT 509
           GPR   R+ AP     M  ++  V +W       G    AG P      KTGTS G+RD 
Sbjct: 558 GPR---RVVAPELARSMDTMLGAVVSW-------GTGRAAGLPDRTARGKTGTSQGYRDA 607

Query: 510 WAIGWDGRYVVGVWLGRADGTPVPGAFGAEL 540
           W +G+ G+ + GVW+G  DGTP+    G  L
Sbjct: 608 WFVGYAGKTLAGVWVGNDDGTPMRDVTGGIL 638