Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

 Score =  192 bits (489), Expect = 4e-53
 Identities = 187/609 (30%), Positives = 281/609 (46%), Gaps = 48/609 (7%)

Query: 1   MSGLCAAVVIGVVAFNAWVEKTPMPATLAETATE---LRDRNGQLLRAYPVADGIWRMAT 57
           ++G+  A+ + V+A N +    P+  +  E       + D  G ++    V  G      
Sbjct: 42  IAGVVLALGVLVLAINLYT--MPLSPSFQEPERSGFLIADAEGTVVATRGVTAG---RPV 96

Query: 58  TVDQVDAGYRAMLLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVAR-- 115
            + ++ A     ++ +ED+RF DH GVD   + RA    L  G    G STL+ Q+ +  
Sbjct: 97  ALAEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKNT 156

Query: 116 LLEDGSTGRWAGKLRQIRLALALERRLSKAQILELYLIHAPFGGNIEGVRAASYAWFGKE 175
           LL    T  +  K+++  LAL +ER+L+K +ILE YL     G    GV AA+  +F K 
Sbjct: 157 LLTPEKT--FTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGSYGVDAAARRYFNKP 214

Query: 176 PSRLTPAEAALLVALPQAPEARRPDRMPEDARRARNRVLQRMRNAGVLAADAAETAAQAP 235
            + L+ AE+A++  L QAP    P    + AR+    VL  MR+ G++ AD A T A+A 
Sbjct: 215 VTDLSLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQGLIGADEA-TWAKA- 272

Query: 236 MPRGMRVFPQLAP---HLADYLVAETPE-------QARIDLTLEAGLQQRLAQLLTESVA 285
            P  + V P   P    ++D++  E  +          +  TL+  LQ    Q + E +A
Sbjct: 273 HPASLAVPPVELPAYGAVSDWIADEARKALGPLSGDFLVVSTLDRRLQVLAQQTIQEGMA 332

Query: 286 RQDARLSA--AVLVADHQSGEILASVGSSGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGL 343
            + A L A  A LVA    G +LA VG   Y++     F    +A R PGS  K  VY  
Sbjct: 333 AEGAGLRATQAALVAMAPDGRVLAMVGGRDYQE---SQFNRAVQARRQPGSIFKLFVYLT 389

Query: 344 AFDQGLAHPETLIHDGPIDIDGYAPQNF-DGRFRGDLRIRRALQLSLNTPVIQLTQALGP 402
           A       P+  I D P+ IDG++P+N+  G   G + +R A   S N   ++L +A+G 
Sbjct: 390 ALSNNW-RPDDPIDDTPLTIDGWSPENYGGGAGHGSVPLRVAFAHSYNLAAVRLQEAVGR 448

Query: 403 ARLMSALRRGGARPRLPGGKPGLAVALGGVGVSLRDLVQVYAGLGA--GGQGPRLRARLQ 460
             +++  R  G +  L   +P  ++ALG    +L DL   +A + A      PR+   L+
Sbjct: 449 EAVIATARSMGLKDDL---QPLPSLALGTFPATLLDLTSAFAAVAADRATVQPRVIEVLR 505

Query: 461 APYE---RMPRLMSKVSAWQIG---DILRGVPPPA---GAPAGMVAY-KTGTSYGHRDTW 510
            P     R P   S  + W      D+L  V        A  G+  Y KTGT+  +RD W
Sbjct: 506 TPGSGEIRPPVRQSGRAPWPRASALDLLNAVVTQGTGRAAALGVPTYGKTGTTQDNRDAW 565

Query: 511 AIGWDGRYVVGVWLGRADGTPVPGAFGAELAAPL--LFEAFGRIGRGFTPFPASPASTLR 568
            IG+ G  V+GVW+G  D TP+ G  G  L A L   F A    G      PA+P +   
Sbjct: 566 FIGFAGNLVIGVWVGNDDETPMTGISGGGLPAKLWQSFAARALAGGVAGSAPAAPIAAAT 625

Query: 569 VATAELPLP 577
            AT     P
Sbjct: 626 TATLPAAAP 634