Pairwise Alignments

Query, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

Subject, 776 a.a., peptidoglycan glycosyltransferase PbpC from Pseudomonas fluorescens SBW25-INTG

 Score =  395 bits (1014), Expect = e-114
 Identities = 241/532 (45%), Positives = 305/532 (57%), Gaps = 10/532 (1%)

Query: 23  PMPATLAETATELRDRNGQLLRAYPVADGIWRMATTVDQVDAGYRAMLLRYEDKRFYDHS 82
           P+P    + A  +   +G  L  +  A+G+WR      +V   Y   LL YED+ FY H 
Sbjct: 29  PLPLPQDDLARVVLAEDGTPLWRFADANGVWRYPVQTSEVSPYYLEALLTYEDRWFYQHP 88

Query: 83  GVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDGSTGRWAGKLRQIRLALALERRL 142
           GV+ LAL+RA  Q L   RVVSGGSTLSMQVARLL+  S   + GKLRQ+     LE  L
Sbjct: 89  GVNPLALVRATWQNLTGTRVVSGGSTLSMQVARLLDPHSR-TFHGKLRQLWRTAQLEWHL 147

Query: 143 SKAQILELYLIHAPFGGNIEGVRAASYAWFGKEPSRLTPAEAALLVALPQAPEARRPDRM 202
           SKA+IL LYL  APFGG ++GV AAS+A+ GK PS+LT AEAALL  LPQAP   RPDR 
Sbjct: 148 SKAEILNLYLNRAPFGGTLQGVAAASWAYLGKSPSQLTHAEAALLAVLPQAPSRLRPDRH 207

Query: 203 PEDARRARNRVLQRMRNAGVLAADAAETAAQAPMPRGMRVFPQLAPHLADYLVAETPEQA 262
           P+ A+ AR++VL+R+    V    A + A + P+    R+ P LAP LA  L        
Sbjct: 208 PQRAQEARDKVLRRLAEFQVWPQAAVDEALEEPLLLAPRLEPSLAPLLARRL-NRPDSPP 266

Query: 263 RIDLTLEAGLQQRLAQLLTESVARQDARLSAAVLVADHQSGEILASVGSSGYRDDLRQGF 322
            I  TL+A LQ+RL  LL    AR     SAA+LV + ++  + A +GS    D  R G 
Sbjct: 267 LIRTTLDATLQRRLEDLLLGWRARLPEHTSAAILVVEEETMAVRAYLGSVDINDAKRFGH 326

Query: 323 VDMTRAPRSPGSTLKPLVYGLAFDQGLAHPETLIHDGPIDIDGYAPQNFDGRFRGDLRIR 382
           VDM  A RSPGSTLKP +YG+A D GL H E+L+ D P     Y P NF   F G +   
Sbjct: 327 VDMISALRSPGSTLKPFLYGMALDDGLIHSESLLQDVPRRYGDYRPGNFSMGFTGAVPAS 386

Query: 383 RALQLSLNTPVIQLTQALGPARLMSALRRGGARPRLPG-GKPGLAVALGGVGVSLRDLVQ 441
            AL  SLN P +QL +A GP R  + +R GG    LP   +P LA+ LGG G  L DLV 
Sbjct: 387 TALSSSLNLPAVQLLEAYGPKRFAAEMRIGGVPLALPALAEPNLALILGGAGSRLEDLVS 446

Query: 442 VYAGLGAGGQGPRLRARLQAPYERMPRLMSKVSAWQIGDILRGVPPPAGAPAG------M 495
            Y+     G+   +R +        P L+S  +AW +  IL G   P   P        +
Sbjct: 447 GYSAFARDGRSANIRLQPDDTLRERP-LLSPGAAWIVRRILSGQARPDRDPRAELVQRPV 505

Query: 496 VAYKTGTSYGHRDTWAIGWDGRYVVGVWLGRADGTPVPGAFGAELAAPLLFE 547
           +A+KTGTSYG RD WAIG   RY++GVW+GR DGTPVPG FG   AAPL+ +
Sbjct: 506 LAWKTGTSYGFRDAWAIGVGPRYLIGVWIGRPDGTPVPGQFGLASAAPLMLQ 557