Pairwise Alignments

Query, 368 a.a., ABC transporter permease protein from Phaeobacter inhibens DSM 17395

Subject, 340 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  377 bits (969), Expect = e-109
 Identities = 193/362 (53%), Positives = 248/362 (68%), Gaps = 28/362 (7%)

Query: 4   SPLNQRRWSNFCRNRRAFWSLWIFSVLFGISLFAEFVANDKPMLVSYRGEYFTPVFNFYP 63
           SPL +RR+  F +NRR +WSLW+F  LF ++L  E +ANDKP++VSY+G  + PVF  + 
Sbjct: 5   SPLGRRRFERFKKNRRGWWSLWLFIGLFILTLGGELIANDKPLVVSYQGSLYFPVFKRHT 64

Query: 64  ETAFGGDFQTEAAYRDPEVQCLIASGGVEDCFDDPEGILEEIETGTFAAEGFVEGWAIWP 123
           E  FGG    +A YR   VQ LI   G                           GW  +P
Sbjct: 65  EQEFGGQLPFQADYRSSYVQNLIHKDG---------------------------GWLWFP 97

Query: 124 PIPYSFNT-TVDRPGAAPLPPNGQNLLGTDDTKRDVLARVIHGFRLSILFTLMVTGAATL 182
           PIP+S +T   D    AP PP+  N LGTDD  RDVLARVI G R+SILF L +T  +TL
Sbjct: 98  PIPFSDDTPNYDLNQPAPSPPSTVNWLGTDDQSRDVLARVIFGARVSILFALALTAISTL 157

Query: 183 VGIAAGAVQGFFGGWLDLIFQRVIEIWGSIPQLYVIIIMFAILGRSFWLLVVLMILFSWT 242
           +GIAAGA+QG++GGW+DL+ QR++E+W  +P LY++II+   +  +FW L+ +M LFSW 
Sbjct: 158 IGIAAGALQGYYGGWVDLLGQRLLEVWSGLPVLYLLIILSGFVEPNFWWLLGIMALFSWL 217

Query: 243 ALVSVVRAEFLRARNLEYVRAAKALGVGNMTIMFRHMLPNAMVATLTFLPFIVTGTIGTL 302
           ALV VVRAEFLR RNLEYV+AA+ALG+ +  ++ RH+LPNAM ATL++LPFI+TG I TL
Sbjct: 218 ALVDVVRAEFLRGRNLEYVKAARALGLSDRKVIMRHILPNAMNATLSYLPFILTGAISTL 277

Query: 303 AGLDFLGFGLPSSAPSLGELTLQAKQNLEAPWLAFTAFFTFAIMLSLLVFIFEGVRDAFD 362
             LDFLGFG+P+ + SLGEL  Q KQNL+APWL  TAFFT A++LSLLVFI E +RDAFD
Sbjct: 278 TALDFLGFGMPAGSASLGELIAQGKQNLQAPWLGLTAFFTLALILSLLVFIGEALRDAFD 337

Query: 363 PR 364
           PR
Sbjct: 338 PR 339