Pairwise Alignments

Query, 368 a.a., ABC transporter permease protein from Phaeobacter inhibens DSM 17395

Subject, 392 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  544 bits (1401), Expect = e-159
 Identities = 262/366 (71%), Positives = 305/366 (83%)

Query: 3   LSPLNQRRWSNFCRNRRAFWSLWIFSVLFGISLFAEFVANDKPMLVSYRGEYFTPVFNFY 62
           LSPL QRRW NF  NRRA+WSL IF  LF +SLFAE +ANDKP++VSY+GE+  PV  FY
Sbjct: 27  LSPLGQRRWRNFKANRRAYWSLIIFGTLFVLSLFAELIANDKPIIVSYQGEWHFPVAQFY 86

Query: 63  PETAFGGDFQTEAAYRDPEVQCLIASGGVEDCFDDPEGILEEIETGTFAAEGFVEGWAIW 122
           PETAFGGDF+TEA YRD EVQCLI SGG+EDCFDDPEGI+E+ + G    +   +GW +W
Sbjct: 87  PETAFGGDFRTEAVYRDAEVQCLIISGGLEDCFDDPEGIIEDAQDGEVLGQEIDKGWLLW 146

Query: 123 PPIPYSFNTTVDRPGAAPLPPNGQNLLGTDDTKRDVLARVIHGFRLSILFTLMVTGAATL 182
           P IPYSF+T  D  G AP  P+  + LGTDDT RDVLARVI+GFRLS+ F L+VT   ++
Sbjct: 147 PLIPYSFDTINDIQGTAPSAPDANHWLGTDDTARDVLARVIYGFRLSVAFALVVTFLTSV 206

Query: 183 VGIAAGAVQGFFGGWLDLIFQRVIEIWGSIPQLYVIIIMFAILGRSFWLLVVLMILFSWT 242
           +GIAAGAVQG+FGG  DL+FQR+IE+WG+ P LY+III+ AI   +FWLLV LM+LF WT
Sbjct: 207 IGIAAGAVQGYFGGLTDLLFQRIIELWGATPSLYIIIIVAAIFQMNFWLLVFLMVLFGWT 266

Query: 243 ALVSVVRAEFLRARNLEYVRAAKALGVGNMTIMFRHMLPNAMVATLTFLPFIVTGTIGTL 302
           ALV VVRAEFLRARN EYVRAA+ALGV N+ IMFRH+LPNAMVAT+T LPFIVTGT+ +L
Sbjct: 267 ALVGVVRAEFLRARNFEYVRAARALGVSNVVIMFRHVLPNAMVATVTMLPFIVTGTVASL 326

Query: 303 AGLDFLGFGLPSSAPSLGELTLQAKQNLEAPWLAFTAFFTFAIMLSLLVFIFEGVRDAFD 362
           A LDFLGFGLPSSAPSLGELTLQAKQNL+APWL FTAFFTFAIMLSL+VF+FEG+RDAFD
Sbjct: 327 ATLDFLGFGLPSSAPSLGELTLQAKQNLQAPWLGFTAFFTFAIMLSLMVFVFEGIRDAFD 386

Query: 363 PRKTFS 368
           PRKTFS
Sbjct: 387 PRKTFS 392