Pairwise Alignments

Query, 242 a.a., cytochrome c oxidase subunit 2 from Phaeobacter inhibens DSM 17395

Subject, 201 a.a., cytochrome c oxidase, cbb3-type, subunit II (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (576), Expect = 3e-64
 Identities = 115/222 (51%), Positives = 147/222 (66%), Gaps = 29/222 (13%)

Query: 7   HKILETNATLLLVCSFLVVTIGGLVQIAPLFWLENTIEEVEGMRPYTPLELAGRDIYIRE 66
           H+++E N  LL + + LV++IGGLVQI PL + ++T E V+G+RPYT LEL GRDIYIRE
Sbjct: 5   HELIEKNIGLLGIFTVLVISIGGLVQITPLLFQKDTTEPVKGLRPYTALELEGRDIYIRE 64

Query: 67  GCYVCHSQMIRPMRDEVERYGPYSLAAESMYDHPFQWGSKRTGPDLARVGGRYSDEWHVD 126
           GCY CHSQMIRP+R E ERYG YS+A ES++DHPFQWGSKRTGPDLARVGGRYSD+WH  
Sbjct: 65  GCYNCHSQMIRPLRAETERYGHYSVAGESVWDHPFQWGSKRTGPDLARVGGRYSDKWHEV 124

Query: 127 HLRDPQSVVPESVMPKYGFLENNRIDGEYIGDVMAANAFVGVPYSDTMLENARADFRAQS 186
           HL DP++VVP+S MP + +L +N++DG+     M      GVPY+D  + NA+       
Sbjct: 125 HLIDPRAVVPQSNMPGFPWLADNKLDGKLTAQKMEVFRGFGVPYTDADIANAQ------- 177

Query: 187 NPDADYDGLLERYGEKVSVRNFDGQPGISEADALIAYLQMLG 228
                                     G +E +A+IAYLQ LG
Sbjct: 178 ----------------------KAVEGKTEMEAIIAYLQSLG 197