Pairwise Alignments

Query, 242 a.a., cytochrome c oxidase subunit 2 from Phaeobacter inhibens DSM 17395

Subject, 208 a.a., cytochrome c oxidase, cbb3-type, subunit II (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  214 bits (545), Expect = 1e-60
 Identities = 111/222 (50%), Positives = 145/222 (65%), Gaps = 22/222 (9%)

Query: 7   HKILETNATLLLVCSFLVVTIGGLVQIAPLFWLENTIEEVEGMRPYTPLELAGRDIYIRE 66
           H+I+E N  LL + + + ++ G LV+I PL + ++T E VEG++PYT L+L GRDIY+RE
Sbjct: 5   HEIVEKNIGLLAIFTVIAISFGSLVEITPLIFQKDTTEPVEGLKPYTALQLEGRDIYVRE 64

Query: 67  GCYVCHSQMIRPMRDEVERYGPYSLAAESMYDHPFQWGSKRTGPDLARVGGRYSDEWHVD 126
           GCY CHSQMIRP+R E ERYG YS+A ES++DHPFQWGSKRTGPDLARVGGRYSD+WH  
Sbjct: 65  GCYNCHSQMIRPLRAETERYGHYSVAGESVWDHPFQWGSKRTGPDLARVGGRYSDKWHEV 124

Query: 127 HLRDPQSVVPESVMPKYGFLENNRIDGEYIGDVMAANAFVGVPYSDTMLENARADFRAQS 186
           HL DP++VVP+S MP + +L  N++DG+  GD M            T+L N         
Sbjct: 125 HLIDPRAVVPQSNMPAFPWLAENKLDGKLTGDKM------------TILRNMH------- 165

Query: 187 NPDADYDGLLERYGEKVSVRNFDGQPGISEADALIAYLQMLG 228
                Y G  + Y ++          G +E +ALIAYLQ LG
Sbjct: 166 --KGGYKG-NDLYTDEEIAGAQKAVEGKTEMEALIAYLQSLG 204