Pairwise Alignments

Query, 301 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (518), Expect = 3e-57
 Identities = 106/283 (37%), Positives = 168/283 (59%), Gaps = 5/283 (1%)

Query: 10  FANVVDQGGFTDAAKKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTEIGLAYYDRA 69
           F  V +   FT A K++GIS + VS+ V +LE RL  +LL RTTR+VS TE G  YY   
Sbjct: 10  FVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTEEGHLYYRHC 69

Query: 70  RRVLNDAGEADALVTSMQSAPSGLLRISVATDFGVNHLSPVLSDFLRDFPDITVNMVLNN 129
           R+VL+   EA+  ++S++  P GLLR++    +G  ++ PV++DFL  +P++ V++ L N
Sbjct: 70  RQVLDGLEEAERALSSLRGLPQGLLRMTAPVAYGEKYILPVVNDFLLAYPNVEVDIALTN 129

Query: 130 RYVELISEGFDMALRIGELEDSSLRARKLTETTKRMIASPAYLEKFGRPQKIDDLNMHKL 189
           R V L+  G D+A+RIG+L DSSL A+++++    + ASP YL++FG P  + +L+ H  
Sbjct: 130 RQVRLVDAGIDLAIRIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPHSLSELSRHNC 189

Query: 190 LHYSNQSSGSMWKITAPSGEKRQVRTSGWLSVNDGQSLLNAAISGLGIAYLPSYLYSDAM 249
           L      +   W+     G +RQ++  G L  N G  L +AA+ GLG+  LP+Y     +
Sbjct: 190 L----IGNHDYWRF-LEQGRERQLKIKGNLRCNTGHGLRDAALKGLGLVQLPNYYIGQDL 244

Query: 250 AEGLVEDVMPSLPMETQGIYAVYPPGRFTQPKVRAFIDFLANA 292
             G +  V+ +     +G++A+YP  R   PKV+  ++FL  A
Sbjct: 245 KAGRLVSVLNAYQEPNEGVWALYPQNRHLSPKVKLMVEFLDRA 287