Pairwise Alignments

Query, 235 a.a., putative helix-turn-helix protein from Phaeobacter inhibens DSM 17395

Subject, 219 a.a., Helix-turn-helix type 11 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 73/212 (34%), Positives = 97/212 (45%), Gaps = 7/212 (3%)

Query: 1   MERTGRLFEVIQILRAASAPIRAEDLAEKLEVSKRTIYRDIAALQGMRTPIEGEAGIGYM 60
           M R  RL  +IQ L    A   AE LA +  V++RTIYRD+  L+    P+ G  G GY 
Sbjct: 1   MSRPERLKALIQSLGTGPARTAAE-LAARFGVTERTIYRDMDRLRAEGVPLAGTPGQGYR 59

Query: 61  LRKGYDLPPLNFDEEELEALYVGLSLLMRTGDGALQEAAIRVCRKVMECRSPGDRLQVAP 120
           L   + LPPL     ELEAL++GLS++   GD  L  AA  +  ++    S       A 
Sbjct: 60  LTAAFALPPLALSARELEALHLGLSIVGEAGDAGLAAAAASLSARIDGALSEDAGTAGAR 119

Query: 121 WGGAPQDDPEQGCVSKGL--LRQAVRESRKLHLTYLGPDSGETRRVLRPLALIYNVETTL 178
           WG  P          + L  LR A+R  +K+ L     D  E +  +R LAL Y+    +
Sbjct: 120 WGFTPTPTGTAAEYLRFLPTLRAALRARQKIALRL--RDGSEHQ--MRLLALEYHGRLWI 175

Query: 179 LAAWCELRGGFRHFRTDRMLCADLLDDSFATE 210
              WCE  G F   R D +    LL   F  E
Sbjct: 176 CGGWCEGCGAFHRVRLDEIRDHRLLSALFVDE 207