Pairwise Alignments

Query, 505 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (753), Expect = 4e-84
 Identities = 177/489 (36%), Positives = 278/489 (56%), Gaps = 27/489 (5%)

Query: 1   MTQPLLSLQGLTKAYPGVVANDTVSFDIGAGEVHALLGENGAGKSTLVKMIYGLVKPDSG 60
           MTQ +L+L  + KA+PGV A D  S ++  G V AL+GENGAGKSTL+K++ G+   D+G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  KMLLHGEPYTPGEPRQARADGIAMVFQHFSLFDALNVAENIALGME-TPPALRDLATQIR 119
            +   G+P +   PR ++  GI+++ Q  +L   L +AENI LG E T P  R L  ++ 
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120

Query: 120 KVSETYGLPLDPYRT----VGDLSAGERQRVEIIRCLLQDPKLLIMDEPTSVLTPQEVEI 175
           + ++     L+   +    +G+LS GE+Q VEI + L  + K++IMDEPT  LT  E E 
Sbjct: 121 RKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETES 180

Query: 176 LFQTLQKLRSEGTSILYISHKLEEIRTLCDHATILRLGKNVGECVPSETSARDMAEMMVG 235
           LF  + +LR +G  I+YISH+L+EI  +CD  T+LR GK +GEC   +T+   + EMMVG
Sbjct: 181 LFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVG 240

Query: 236 TALQTP-ERSGRALGDVALDISGLSVPAPSAFGTALKNVHMTVRKGEILGVGGVAGNGQD 294
             L+    R     GD++L++ GL+       G+ + +V  T++KGEILGV G+ G G+ 
Sbjct: 241 RKLEEQYPRIAAQQGDISLEVIGLT-------GSGVHDVSFTLKKGEILGVSGLMGAGRT 293

Query: 295 ELLGVLSGETTTAADAVTLDGAPIGNLGPVARRRLGILAAPEERLGHAAAPDMSLTENAM 354
           EL+ V+ G   +    + L+G  +  + P      GI    E+R G      +S+ EN  
Sbjct: 294 ELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMS 353

Query: 355 LTAATREGLASRGFLKWGLAQEFAEKV------IKSFDVRTPGPENAARSLSGGNLQKFV 408
           L A  +        L  G+    A++V      I+ F+++TP  E    +LSGGN QK  
Sbjct: 354 LCALDQ--------LSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVA 405

Query: 409 IGREVLQRPDVLVVNQPTWGVDAAAAAAIRQSLLDLAAGGTAVICISQDLDELMEIADSF 468
           I + ++ +P VL++++PT GVD  A   I Q +    A G ++I +S ++ E++ ++D  
Sbjct: 406 IAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRI 465

Query: 469 AALNEGRLS 477
             ++EGR+S
Sbjct: 466 LVMHEGRIS 474



 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 24/229 (10%)

Query: 24  VSFDIGAGEVHALLGENGAGKSTLVKMIYGLVKPDSGKMLLHGEPYTPGEPRQARADGIA 83
           VSF +  GE+  + G  GAG++ L+K+IYG +  + G + L+G    P  P+   A+GIA
Sbjct: 272 VSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIA 331

Query: 84  MVFQHFS---LFDALNVAENIALGMETPPALRDLA--TQIRKVSETYGLPLDPY------ 132
            + +      L   L+V EN++L      AL  L+   QIR   E   + +D +      
Sbjct: 332 YISEDRKGDGLVLGLSVKENMSLC-----ALDQLSKGVQIRHADEV--IAVDDFIRLFNI 384

Query: 133 ------RTVGDLSAGERQRVEIIRCLLQDPKLLIMDEPTSVLTPQEVEILFQTLQKLRSE 186
                 + +G+LS G +Q+V I + L+  PK+LI+DEPT  +     + ++Q + + ++E
Sbjct: 385 KTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444

Query: 187 GTSILYISHKLEEIRTLCDHATILRLGKNVGECVPSETSARDMAEMMVG 235
           G SI+ +S ++ E+  + D   ++  G+  GE + SE     +    VG
Sbjct: 445 GMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVG 493