Pairwise Alignments

Query, 338 a.a., putative sugar transport system, periplasmic protein from Phaeobacter inhibens DSM 17395

Subject, 291 a.a., ribose ABC transporter substrate-binding protein RbsB from Pantoea sp. MT58

 Score =  100 bits (250), Expect = 3e-26
 Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 21/288 (7%)

Query: 1   MKKLLLGTAIGFAAMTGSAFAAEGVTACLITKTDTNPFFVKMKEGAEAKAAELGMTLKSF 60
           MKKL     I  A ++ SA A +  T  L+  T  NPFFV +KEGA+ +A +LG  L   
Sbjct: 1   MKKLTALAMILGATLSTSAMAKD--TIALVVSTLNNPFFVSLKEGAQKEADKLGYNLVVL 58

Query: 61  AGKVDGDHETQVAAIETCIADGAKGILLTASDTSSIVPAVQQARDAGLVVIALDTPLEPI 120
             +   +   ++A ++     G K +L+  +D+ ++  AV+ A  A + VI LD  +   
Sbjct: 59  DSQ--NNPAKELANVQDLTVRGTKLLLINPTDSDAVGNAVKMANQAKIPVITLDR-VAAQ 115

Query: 121 DSADATFATDNFLAGELIGKWAAASLGDEAANAKIAMLDLAVSQPTVGVLRDQGFLQGFG 180
            +  +  A+DN   G++ G + A  +G+   NAKI  L   ++  +    R +GF Q   
Sbjct: 116 GTVVSHVASDNRFGGKMAGDFIAKKVGE---NAKIIELQ-GIAGTSAARERGEGFKQA-- 169

Query: 181 IDLGDPNKWGDETDPRIVGNDITAGNEEGGRRAMENLLAKDPMINVVYTINEPAAAGAYE 240
               D +K+      +I+ +     +   G   M+NLL   P +  V+  N+  A GA  
Sbjct: 170 ---ADAHKF------QILASQPADFDRTKGLNVMQNLLQAHPDVQAVFAQNDEMALGALR 220

Query: 241 ALKSIGRENDVLIVSVDGGCPGVQNIKDGVIGATSQQYPLLMASKGIE 288
           AL++ G+   V++V  DG   GV+ ++ G + AT  Q P  +   G++
Sbjct: 221 ALQTAGK-TGVIVVGFDGTADGVKAVEAGKLSATVAQMPEKIGMIGVD 267