Pairwise Alignments

Query, 338 a.a., putative sugar transport system, periplasmic protein from Phaeobacter inhibens DSM 17395

Subject, 337 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  545 bits (1404), Expect = e-160
 Identities = 270/338 (79%), Positives = 300/338 (88%), Gaps = 1/338 (0%)

Query: 1   MKKLLLGTAIGFAAMTGSAFAAEGVTACLITKTDTNPFFVKMKEGAEAKAAELGMTLKSF 60
           MK L+LGTA+  A M+G+A A +  +ACLITKTDTNPFFVKM+EGA AKA ELG+ LK+F
Sbjct: 1   MKNLMLGTALACATMSGAALA-DTTSACLITKTDTNPFFVKMREGAVAKAEELGVELKTF 59

Query: 61  AGKVDGDHETQVAAIETCIADGAKGILLTASDTSSIVPAVQQARDAGLVVIALDTPLEPI 120
           AGK DGDHETQV AIETCI DGAKGIL+TASDTSSI  AVQQARDAGLVVIALDTPL P 
Sbjct: 60  AGKFDGDHETQVQAIETCILDGAKGILITASDTSSITGAVQQARDAGLVVIALDTPLTPA 119

Query: 121 DSADATFATDNFLAGELIGKWAAASLGDEAANAKIAMLDLAVSQPTVGVLRDQGFLQGFG 180
           D+ADATFATDN++AG LIG+WA A +GD AA+AKIAML++ VSQPTVGVLR+QGFL+GFG
Sbjct: 120 DAADATFATDNYVAGLLIGQWARAQMGDAAADAKIAMLNIQVSQPTVGVLRNQGFLEGFG 179

Query: 181 IDLGDPNKWGDETDPRIVGNDITAGNEEGGRRAMENLLAKDPMINVVYTINEPAAAGAYE 240
           ID+GDPN+WGDETDPRIVG D+T G+EEGGR AMEN+LA DPM+NVVYTINEPAAAGAYE
Sbjct: 180 IDIGDPNRWGDETDPRIVGQDVTQGSEEGGRAAMENILAADPMVNVVYTINEPAAAGAYE 239

Query: 241 ALKSIGRENDVLIVSVDGGCPGVQNIKDGVIGATSQQYPLLMASKGIEAISAWATTGEKP 300
           ALK+IGRENDVLIVSVDGGCPGVQN+ DGVIGATSQQYPLLMAS GIEAI  WA TGEKP
Sbjct: 240 ALKAIGRENDVLIVSVDGGCPGVQNVADGVIGATSQQYPLLMASLGIEAIKTWAETGEKP 299

Query: 301 APTPGKAFFDTGVALVTDQPAEGVDSIDTAEGTNLCWG 338
           APTPGK FFDTGVALVTD PA+GV+SI   EG NLCWG
Sbjct: 300 APTPGKDFFDTGVALVTDTPADGVESISVEEGRNLCWG 337