Pairwise Alignments

Query, 258 a.a., ABC transporter ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 509 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  152 bits (383), Expect = 2e-41
 Identities = 90/248 (36%), Positives = 146/248 (58%), Gaps = 10/248 (4%)

Query: 1   MEPILKARGLVKRYGRVTALDHCDFDLMPGEILAVIGDNGAGKSSLIKAVSGAVVPD-AG 59
           +EP+L+ +G+ K +  +  L +    + PGEI A++G+NGAGKS+L+K +SGA   D  G
Sbjct: 3   LEPLLEMQGISKTFNGLRVLKNVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGG 62

Query: 60  EVWLEGRRVQFHTPIDARKEGIETVYQTLAMSPALSIADNMFMGRELRKPGWRGSVLRQL 119
           E+ + G+ +    P  A+  GI  +YQ L++ P LS+A+N+++GRELR+ GW       +
Sbjct: 63  EIRIGGQTIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRR-GWT------I 115

Query: 120 DRARMEQIARDKLNELGLATIQNINQAVETLSGGQRQGVAVARAAAFGSKVIILDEPTAA 179
           DR  ME    + L  LG          V +LS  +RQ V +ARA    +K++++DEPT  
Sbjct: 116 DRKGMEAGCIEVLQRLGAEFTPATR--VSSLSIAERQLVEIARALHAHAKILVMDEPTTP 173

Query: 180 LGVKESRRVLELIQDVKSRGIPIILISHNMPHVFEVADRIHVHRLGKRLCVIDPKQHSMS 239
           L  +E+ R+  LI+ ++S+G+ II ISH M  ++E++DR+ V R G+ +  +  +  S  
Sbjct: 174 LSSRETDRLFALIKQLRSQGLAIIYISHRMAEIYELSDRVSVLRDGQYIGELTREALSAE 233

Query: 240 DAVGYMTG 247
             V  M G
Sbjct: 234 VLVKMMVG 241



 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 22  HCDFDLMPGEILAVIGDNGAGKSSLIKAVSGAVVPDAGEVWLEGRRV-QFHTPIDARKEG 80
           +C FDL  GE+L + G  GAG++ L + +  A    +G + + G+ V Q  TP DA + G
Sbjct: 275 NCSFDLHAGEVLGIAGLVGAGRTELARLIFAADPRTSGTLEVVGKTVTQLRTPADAIRAG 334

Query: 81  IETVYQT-----LAMSPALSIADNMFMGRELRKPGWRGSVLRQLDRARMEQIARDKLNEL 135
           +  VY T       +   +S+ADN+ +   +  P     VL   DR    Q A D +  L
Sbjct: 335 V--VYLTEDRKAQGLFLDMSVADNINVCACV--PDAHAGVL---DRGHAAQRATDAIKSL 387

Query: 136 GLATIQNINQAVETLSGGQRQGVAVARAAAFGSKVIILDEPTAALGVKESRRVLELIQDV 195
            +         V  LSGG +Q V +AR       V+ILDEPT  + +     +  +I  +
Sbjct: 388 SIRVASG-KVNVGALSGGNQQKVLLARLLEVKPHVLILDEPTRGVDIGSKSEIYRIINQL 446

Query: 196 KSRGIPIILISHNMPHVFEVADRIHVHRLGK 226
              G+ I++IS  +P +    DR+ + R G+
Sbjct: 447 AQAGVGIVVISSELPEIIGTCDRVLIMREGQ 477