Pairwise Alignments

Query, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

Subject, 608 a.a., excinuclease ABC subunit UvrC from Rhodanobacter denitrificans MT42

 Score =  498 bits (1283), Expect = e-145
 Identities = 276/619 (44%), Positives = 379/619 (61%), Gaps = 16/619 (2%)

Query: 11  ETARPTHRTGYAVIQDYLKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNYS-RPGHS 69
           ++A+P    G A    +++TL +SPGVYR  D+   +LYVGKA NL+ RV +Y  +P   
Sbjct: 2   QSAQPLPFDGKA----FVRTLSTSPGVYRHFDAAGELLYVGKAGNLKKRVGSYFLKPRME 57

Query: 70  PRIERMIAATASMMFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHAF 129
           PRI  M+A  A +    TRTE EALLLE  LIK LKP+YN+LLRDDKS+P I ++    +
Sbjct: 58  PRIAAMVAQIARVEITVTRTEGEALLLESQLIKSLKPRYNILLRDDKSYPYIYLSTGEDY 117

Query: 130 PQIKKHRGTRREKGSYFGPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRPCLQYQIK 189
           P++  HRG +   G YFGP+ S  AV  +LN +QK F +R C ++ F +RTRPCL YQI 
Sbjct: 118 PRLAFHRGAKNLPGRYFGPYPSVYAVRESLNLMQKLFKVRQCEDSYFRNRTRPCLLYQIG 177

Query: 190 RCTAPCTGEISAEDYASSVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAALRDRI 249
           RC+APC G IS EDY + VR AE FL GRS  + +ELAE M  AS+A++FERAA LRD++
Sbjct: 178 RCSAPCVGLISVEDYRNDVRHAEMFLEGRSNAVIDELAEAMEQASKALQFERAAKLRDQV 237

Query: 250 KALTQVQTSQGINPRGVAEADVIGLHLDSGQACVQVFFIRANQNWGNQDFYPRINGDVSP 309
            AL Q+Q    +     A+ DVI   +++G ACV V F R   + G +DF+PR+  D  P
Sbjct: 238 AALRQLQAQNHVQGAS-ADMDVIACRIEAGMACVSVLFFRNGISLGTRDFFPRLPLDAEP 296

Query: 310 AEVMEAFIGQFYDNKEPPRQLILSDEIENGDLMEQALSDKAGRRVEILVPQRGEKTELVA 369
           A+V+  FI Q+Y ++  PR+LIL + + +  ++ + L   AGR VE+    RGE+ + + 
Sbjct: 297 ADVLAQFIAQYYLDRPVPRELILGEALADQAILAELLGQYAGRAVELKSSVRGERAQFLQ 356

Query: 370 GAVRNARESLARRMAESATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGGMIVA 429
            A RNA+ SL  R+A   T       + +  GL+  P+RIE +D SH  G   V   +V 
Sbjct: 357 MAERNAQASLTARLASRQTLGTRFDDLQKVLGLDESPRRIECFDISHTLGELTVASCVVF 416

Query: 430 GPEGFMKNAYRKFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLLLIDG 489
           GPEG  K+ YR+FNI G  +TPGDD+  M + L RRF +L + +     G  PD+LLIDG
Sbjct: 417 GPEGPEKSHYRRFNITG--ITPGDDYAAMHQALTRRFRKLAEGE-----GARPDVLLIDG 469

Query: 490 GAGQVSAVAEIMAEHGVQDIPMIGVAKGVDRDHGKEEFHRLGAPAFALQ--RNDPVLYFV 547
           G GQV+   E++ E GV  I ++GVAKG  R  G EE   L      L    + P L+ V
Sbjct: 470 GGGQVAQALEVLKELGVDGIEVVGVAKGPGRRAG-EETLVLADSGRELHPGSSSPALHLV 528

Query: 548 QRMRDEAHRFAIGTHRAKRAKAMGATPLDEVPGVGAARKRALLAHFGSAKAVSRANLSDL 607
             +RDEAHRFAI  HR +R KA   + L++VPG+GA R+ ALL  FG  + + RA + +L
Sbjct: 529 AAVRDEAHRFAISGHRKRREKAREHSVLEDVPGIGARRRTALLKAFGGMQGLERAGVEEL 588

Query: 608 KAVEGVSAALAQRIYDFFH 626
             V+G+   LA+RIY   H
Sbjct: 589 MQVKGIDRGLAERIYASLH 607