Pairwise Alignments

Query, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

Subject, 609 a.a., excinuclease ABC subunit C (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  291 bits (746), Expect = 4e-83
 Identities = 188/606 (31%), Positives = 309/606 (50%), Gaps = 40/606 (6%)

Query: 24  IQDYLKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNYSRPGHSPRIER-MIAATASM 82
           ++  +  L   PGVY+ L++E  ++YVGKA+NL+ RV +Y    H P   R +++  A +
Sbjct: 13  LRGIVANLPEKPGVYQYLNTEGTIIYVGKAKNLKKRVYSYFSKEHEPGKTRVLVSKIADI 72

Query: 83  MFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHAFPQIKKHRGTRREK 142
            ++   TE +ALLLE NLIK+ KP+YNVLL+DDK++P+I V  ++ FP+I + R   +  
Sbjct: 73  RYIVVNTEEDALLLENNLIKKYKPRYNVLLKDDKTYPSICVQNEY-FPRIFRTRKIIKNG 131

Query: 143 GSYFGPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRP-----CLQYQIKRCTAPCTG 197
            SY+GP++   ++   L+ ++  + LR C   +     R      CL+Y IK+C  PC G
Sbjct: 132 SSYYGPYSHLPSMYAVLDLIKHLYPLRTCNLNLSPENIRAGKFKVCLEYHIKKCAGPCVG 191

Query: 198 EISAEDYASSVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAALRDRIKALTQVQT 257
             S EDY  ++ + +  L G +  I   L E+M   +  M+FE A  ++++   +   ++
Sbjct: 192 LQSHEDYLKNIDEIKEILKGNTQDISRMLVEKMQELANEMKFEEAQKIKEKYLLIENYRS 251

Query: 258 SQGINPRGVAEADVIGLHLDSGQACVQVFFIRANQNWGNQDF---YPRINGDVSPAEVME 314
              +    +   DV  +  D   +   V ++       NQ F   Y +   +     +  
Sbjct: 252 KSEVVSSVLHNIDVFSIEEDDSNSAF-VNYLHITNGAINQAFTFEYKKKLNESKEELLTL 310

Query: 315 AFIGQFYDNKEPPRQLILSDEIENGDLMEQALSDKAGRRVEILVPQRGEKTELVAGAVRN 374
             I      K   R++I+  E+           D     V   VPQRG+K +L+  ++ N
Sbjct: 311 GIIEMRERYKSHSREIIVPFEL-----------DLELNNVVFTVPQRGDKKKLLDLSILN 359

Query: 375 ARESLARRMAES------ATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGGMIV 428
            ++  A R+ ++          +LL+ +     L+ PP +IE +DNS+IQGS AV   +V
Sbjct: 360 VKQYKADRLKQAEKLNPEQRSMRLLKEIQNELHLDKPPLQIECFDNSNIQGSDAVAACVV 419

Query: 429 AGPEGFMKNAYRKFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLLLID 488
                  K  YRK+NI+   +   DD+  MKEV+ RR+ R ++E+        PDL++ D
Sbjct: 420 FKKAKPSKKDYRKYNIK--TVVGPDDYASMKEVVRRRYQRAIEENSP-----LPDLIITD 472

Query: 489 GGAGQVSAVAEIMAEHGVQDIPMIGVAKGVDRDHGKEEFHRLGAPA--FALQRNDPVLYF 546
           GG GQ+  V E++ +    +IP+ G+AK  D  H   E    G PA    +++   +   
Sbjct: 473 GGKGQMEVVREVIEDELHLNIPIAGLAK--DNKHRTSEL-LFGFPAQTIGIKQQSSLFRL 529

Query: 547 VQRMRDEAHRFAIGTHRAKRAKAMGATPLDEVPGVGAARKRALLAHFGSAKAVSRANLSD 606
           + +++DE HRFAI  HR KR+K   A+ LD + G+G   K ALL  F S K +  A+L +
Sbjct: 530 LTQIQDEVHRFAITFHRDKRSKRQVASALDSIKGIGEKTKTALLKEFKSVKRIKEASLEE 589

Query: 607 LKAVEG 612
           +  V G
Sbjct: 590 IAKVIG 595