Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 414 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 106/435 (24%), Positives = 164/435 (37%), Gaps = 39/435 (8%)

Query: 1   MKRIAFTTA-ATLAFAANAAYAETEIT---WWHAMGGALGDTVNQIASDFNASQDEYKIT 56
           M++   TTA A L  AA AA A   +    WW + G A    ++ +  D  +    +   
Sbjct: 1   MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAA--LDVLKKDLESKGISWTDM 58

Query: 57  PVFKGTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAK-GATIPVQDLLADNGVDFD 115
           PV  G   E +T   A   AG  P  +Q+   G   +  AK GA   + ++ A  G D  
Sbjct: 59  PVAGGGGTEAMTVLRARVTAGNAPTAVQML--GFDILDWAKEGALGNLDEVAAKEGWD-- 114

Query: 116 INDYIAGVRYFYADSDGKMIGMPFN-SSTPIMYYNIQALEKAGVTAPKTWEEFQTVTAPA 174
               +      ++  DG  I  P N  ST  ++ N  AL+KAG   P TWEE        
Sbjct: 115 --KVVPAALQQFSKYDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPTTWEEL-IALLDK 171

Query: 175 LKEAGYTALSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQI---LVNNDAIKAHFTA 231
            KE G T ++    PW     F +   +  +  N+ Y      +    +  D +K  F  
Sbjct: 172 FKEQGITPIAHGGQPWQDATIFDA---VVLSLGNDFYKQAFIDLDPAALGGDKMKEAFDR 228

Query: 232 VTDWQEKGHFEWFGTGWGDNQTPFEEGKVAM-WLGSSGSFGGLSKKNLP-FDFSATMLPY 289
           +T  +      + G  W        E K  + ++G       L  K +P  DF     P 
Sbjct: 229 MTKLRSYVDDNFSGRDWNLASAMVIENKAGLQFMGDWAKGEFLKAKKVPGTDFVCMRFPG 288

Query: 290 WEGVTKEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVP---- 345
            +G     + TF   +  FAM     ++  A       + S   Q  ++   G VP    
Sbjct: 289 TQG-----SVTF--NSDQFAMFKVSEDKVPAQLQMASAIESPAFQSAFNVVKGSVPARTD 341

Query: 346 ITEAAYEMAKADGHYDRAPAAEVGIQQLSLPGGD-NTKGYRMGFYVQIRDVMNREYGRIL 404
           + +  ++     G  D A A   G    S+  G  N    +   Y    DV+ R++   L
Sbjct: 342 VPDTDFDACGKKGIKDLAEANTNGTLFGSMAHGHANPAAVKNAIY----DVVTRQFNGEL 397

Query: 405 TGETSVEDAFNAIEA 419
             E +V +   A+EA
Sbjct: 398 NSEEAVTELVAAVEA 412