Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 425 a.a., extracellular solute-binding protein, family 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 54.3 bits (129), Expect = 7e-12
 Identities = 52/190 (27%), Positives = 77/190 (40%), Gaps = 11/190 (5%)

Query: 5   AFTTAATLAFAAN---AAYAETEITWWHAMGGALGDTVNQIASDFNASQDEYKITPVFKG 61
           A    A LA AA    AA    E+  W   GG     V+ +   F A    +  +PV  G
Sbjct: 16  ALALVAGLAIAAPKPAAAGGSVEVLHWWTAGGE-AKAVSALKDQFEAEGGTWIDSPVAGG 74

Query: 62  TYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDINDYIA 121
             +  +TA  +   AG  P+ +Q+    +     A+G    + D+      D  +   + 
Sbjct: 75  GGDAAMTALRSRVIAGNPPSAVQL-KGPSIQEWAAEGVVANLDDIAKAENWDKLLPALLK 133

Query: 122 GVRYFYADSDGKMIGMPFN-SSTPIMYYNIQALEKAGVTAPKTWEEFQTVTAPALKEAGY 180
            V  +    +G  + +P N      ++ N   L KAGV  P TW+EF T  A ALK  G 
Sbjct: 134 SVVTY----EGHYVAVPVNIHRVDWLWANPAVLAKAGVAVPTTWDEFNT-AAEALKAKGI 188

Query: 181 TALSQSHLPW 190
             L+    PW
Sbjct: 189 IPLAHGGQPW 198