Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 431 a.a., extracellular solute-binding protein family 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  106 bits (265), Expect = 1e-27
 Identities = 109/447 (24%), Positives = 175/447 (39%), Gaps = 45/447 (10%)

Query: 4   IAFTTAATLAFAANAAYAE-TEITWWH--AMGGALGDTVNQIASDFNASQDEYKITPVFK 60
           +A     +L   A  A AE   +T++   ++GG +   V  +   F     + K+TPV+ 
Sbjct: 10  LAAAALLSLTLLAGTALAEKVNLTFYFPVSVGGPITKIVEGMTEQFMKEHPDIKVTPVYA 69

Query: 61  GTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDINDYI 120
           G Y ETLT  + A R GE P+V  +      T+I  + A +   D+L    + F    + 
Sbjct: 70  GIYRETLTKALTALRGGEPPHVAVLLSTDMYTLID-EDAVVAYDDILKPEEMGFTKAFFP 128

Query: 121 AGVRYFYADSDGKMIGMPFNSSTPIMYYNIQALEKAGV---TAPKTWEEFQTV------- 170
             +R   + + GK  G+PF  ST +MY+N +A + AG+     P  W E   +       
Sbjct: 129 GFMR--NSQTGGKTWGIPFQRSTIVMYWNKEAFKAAGLDPEKGPANWNELVEMGKKLTVR 186

Query: 171 -TAPALKEAGYTALSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHF 229
             +  + + G    S  +  W+F         L         ++  T+   +N       
Sbjct: 187 DASGKVTQWGVAIPSTGYAYWMF-------QALAIQNGVELMNAEGTRTDFDNPKAIEAL 239

Query: 230 TAVTDWQEKGHFEWFGT-GWGDNQTPFEEGKVAMWLGSSGSFGGLSKKNLPFDFSATMLP 288
             + D   K      GT  W      F E K A+   ++G+   + + N PF F   MLP
Sbjct: 240 QFLVDLAYKHEVSPKGTIDWATTPRDFFERKSAIMWTTTGNLTNV-RTNAPFPFGVGMLP 298

Query: 289 YWEGVTKEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVPITE 348
                   PT    GG + +        E KA   F  ++TS+E    W  +TGYV +  
Sbjct: 299 A-SARPGSPT----GGGNFYIFKKATPAERKAAVDFVQWMTSAERAAQWGIDTGYVAVRP 353

Query: 349 AAYEMAKADGHYDRAPAAEVGIQQLS-----LPGGDNTKGYRMGFYVQIRDVMNREYGRI 403
            A+E      +  + P A V   QL+     L   DN +         +   ++      
Sbjct: 354 DAWETPAMKDYVAKFPVAAVARDQLAHAVPELSTHDNQR---------VTKALDDAIQAA 404

Query: 404 LTGETSVEDAFNAIEAEANNLLARFAK 430
           +TG     DA    + EA  +L R+ K
Sbjct: 405 VTGSKKPADALKDAQKEAERILRRYGK 431