Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 433 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  321 bits (822), Expect = 3e-92
 Identities = 175/435 (40%), Positives = 256/435 (58%), Gaps = 17/435 (3%)

Query: 3   RIAFTTAATLAF--AANAAYAETEITWWHAMGGALGDTVNQIASDFNASQDEYKITPVFK 60
           +   +T ATLA   +A +A A+TEI +WHA  G LG+ V +    FNASQDE+ +    K
Sbjct: 2   KYTISTIATLAVLGSAQSALAQTEIEFWHAFTGRLGELVAEQVDTFNASQDEFVVVQSHK 61

Query: 61  GTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDINDYI 120
           G Y ETL AGIAAFRAGEQP+++ VF+ G AT++ A+GA  PV +++ D    FD + YI
Sbjct: 62  GNYSETLNAGIAAFRAGEQPHILMVFEVGTATMMAAQGAIRPVFEVMGDG---FDQSKYI 118

Query: 121 AGVRYFYADSDGKMIGMPFNSSTPIMYYNIQALEKAGV---TAPKTWEEFQTV---TAPA 174
             V+ +Y  +DG M+ +P+NSSTP+++ N   L +AG+   T   TWE+   V    A A
Sbjct: 119 GSVKGYYTSTDGNMLSLPYNSSTPVLWVNRDMLSEAGIDPDTDLSTWEQVGEVLDQLAAA 178

Query: 175 LKEAGYTALSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHFTAVTD 234
             E   T   QS   WI  ENF + H++PFAT  NG+   DT++  N+ A  AH +A+  
Sbjct: 179 GVECPMTTAWQS---WIHLENFSAYHDVPFATQENGFAGADTELAFNSPAQVAHISAMGK 235

Query: 235 WQEKGHFEWFGTGWGDNQTPFEEGKVAMWLGSSGSFGGLSKKNLPFDFSATMLPYWEGVT 294
           W E+G F + G    +    F  G+ A++  SS  + G++ +   F+F    LPYW  V 
Sbjct: 236 WAEEGKFIYAGRR-NEGGANFRAGECALFTESSAGYAGINAE-AEFEFEVRPLPYWTAVA 293

Query: 295 KEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVPITEAAYEMA 354
            +P  T IGGASL+ M GH+AEE    AAF DFL+S E+Q  WH++TGY+PIT  A E+ 
Sbjct: 294 DDPQNTIIGGASLWVMEGHEAEEYAGVAAFMDFLSSPEIQAKWHQDTGYLPITTEAGELT 353

Query: 355 KADGHYDRAPAAEVGIQQLSLPGGD-NTKGYRMGFYVQIRDVMNREYGRILTGETSVEDA 413
           +A G Y+  P  ++ + Q++      N+KG R+G + QIR +++ E   + +G+   + A
Sbjct: 354 RAQGFYEANPGTDIAVIQMTAKEPTANSKGLRLGSFDQIRGIIDEELEAVWSGDKDAQAA 413

Query: 414 FNAIEAEANNLLARF 428
            ++     N LL RF
Sbjct: 414 LDSAVERGNALLRRF 428