Pairwise Alignments

Query, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

Subject, 447 a.a., ABC transporter for Xylitol, periplasmic substrate-binding component (from data) from Dinoroseobacter shibae DFL-12

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 83/377 (22%), Positives = 145/377 (38%), Gaps = 24/377 (6%)

Query: 58  VFKGTYEETLTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADN----GVD 113
           V K  YE  L   +  F AG   +V  + D             +P+ D+ A        D
Sbjct: 72  VIKHPYENALGEQVRDFVAGGDLDVALI-DLVWIGSFAENEWILPLADVQAKFPDAVDPD 130

Query: 114 FDINDYIAGVRYFYADSDGKMIGMPFNSSTPIMYYNIQALEKAGVTA-PKTWEEFQTVTA 172
            DI+D+   V   +   +  + G+PF++ + +M+YN   LE+AG    P TWEE + V  
Sbjct: 131 LDIDDFFPLVLNAFGGWNDTIYGLPFDNYSGLMFYNRCMLEEAGFDGPPSTWEELKDVYG 190

Query: 173 PAL-KEAGYTALSQSHLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHFTA 231
           PAL K+  Y    QS      + +  +R   PF  +    +     +   + A       
Sbjct: 191 PALTKDGKYAFALQSKRNETQSADSFARMLWPFGGSFLNEEFRSNLMSEGSQAGLKFRQE 250

Query: 232 VTDWQEKGHFEWFGTGWGDNQTPFEEGKVAMWLGSSGSFGG-LSKKNLPFDFSATMLPYW 290
           + ++   G   +      +    F +G VAM    S  +   +S +         + P  
Sbjct: 251 LMEYMPDGIVAY---DHAETVNAFSQGDVAMITEWSAFYSSVVSPETSRVADCVEIAP-- 305

Query: 291 EGVTKEPTQTFIGGASLFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVPITEAA 350
           E +     +  +GG SL A+A    E  +A A  F    +S+     + E G VP  ++ 
Sbjct: 306 EPMGPAGRKPALGGFSL-AVASQADEAEQAAAYLFIQWATSKANAREYLERGGVPARQSV 364

Query: 351 YEMAKADGHYDRAPAAEVGIQQLSLPGGDNTKGYRMGF--YVQIRDVMNREYGRILTGET 408
           Y+    +  +   PA     Q       D    +R  F  + +I +++     +++ GE 
Sbjct: 365 YQQDGLE-EFKFVPALVESWQ-------DGVPEFRPRFAEWPEITEIVQEWGTKMMLGEV 416

Query: 409 SVEDAFNAIEAEANNLL 425
           + E+    I      +L
Sbjct: 417 TTEEGAQEIGTRMEEVL 433