Pairwise Alignments

Query, 732 a.a., uvrABC system protein B from Phaeobacter inhibens DSM 17395

Subject, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

 Score =  765 bits (1975), Expect = 0.0
 Identities = 388/677 (57%), Positives = 498/677 (73%), Gaps = 18/677 (2%)

Query: 28  REFVMHTEFDPAGDQPTAIKELSEGVLEGERNQVLLGATGTGKTFTMAKVIEETQRPAII 87
           + F + +++ PAGDQPTAIK+L EG+  G  +Q LLG TG+GKTFT+A VI   QRP II
Sbjct: 3   KAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTII 62

Query: 88  LAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDYYQPEAYVARSDTYIEKESQINEQIDRM 147
           LAPNKTLAAQLYGE K FFP N+VEYFVS+YDYYQPEAYV  +DT+IEK++ +N  I++M
Sbjct: 63  LAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQM 122

Query: 148 RHSATRSLLERDDVIIIASVSCIYGIGSVETYSAMTQDLKVGDEYDQRQVMADLVAQQYK 207
           R SAT++LLER D +I+ASVS IYG+G  ++Y  M   L+ GD  +QR ++  L   QY 
Sbjct: 123 RLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYS 182

Query: 208 RNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLSFFGEELEGITEFDPLTGEKTGT-FDQI 266
           RND AF+RG FRVRG+ ++IFPA  +  A R+  F +E+E I+ FDPLTG  T     + 
Sbjct: 183 RNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARF 242

Query: 267 RVYANSHYVTPKPTLKQAVISIKEELKMRLDQLVGEGKLLEAQRLEQRTNFDIEMLEATG 326
            +Y  +HYVTP+  + +A+  IK EL++R   L+   KLLE QR+ QRT FDIEM+   G
Sbjct: 243 TIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELG 302

Query: 327 HCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDHRRKFTL 386
            C+GIENYSRYL+GRA GEPPPTLF+++P + ++  DESHV+VPQIG M+KGD  RK TL
Sbjct: 303 FCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETL 362

Query: 387 AEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSKWELEQSSGVFAEQVIRPTGLLDP 446
            E GFRLPS +DNRPLKF+E++A+ PQ++FVSATPS++EL +S G  AEQV+RPTGLLDP
Sbjct: 363 VEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDP 422

Query: 447 QVEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDID 506
            +E+RPV  QVDDLL E R   A+  R LVTTLTKRMAEDLTEY+HE G+KVRY+HSDID
Sbjct: 423 IIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDID 482

Query: 507 TLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGR 566
           T+ER+EI+RDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT+GR
Sbjct: 483 TVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGR 542

Query: 567 AARNAEGRVIMYADRITGSMERALGETNRRRDKQIAYNEEHGITPATVKKNVEDVLAGLY 626
           AARN  G+ I+YAD IT SM +A+ ET RRR+KQ+AYNE+ GITP  +K++V+D++    
Sbjct: 543 AARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIME--- 599

Query: 627 AGDVDMNR--------------VTATIDKPMHGANLEAHLAGLREQMRKAAENLEFEEAA 672
            GD+  +R                +   + +    LE  ++ L   M + A+NLEFE AA
Sbjct: 600 LGDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAA 659

Query: 673 RLRDEVKRLEAVDLAVS 689
           + RDE+ +L    +A S
Sbjct: 660 QKRDEIHQLRQQFIANS 676