Pairwise Alignments

Query, 732 a.a., uvrABC system protein B from Phaeobacter inhibens DSM 17395

Subject, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

 Score =  639 bits (1647), Expect = 0.0
 Identities = 331/656 (50%), Positives = 457/656 (69%), Gaps = 20/656 (3%)

Query: 29  EFVMHTEFDPAGDQPTAIKELSEGVLEG--ERNQVLLGATGTGKTFTMAKVIEETQRPAI 86
           +F +  EF P G Q  AI  L + + +   +  Q LLG TG+GKTFT+A VIE+ Q+P +
Sbjct: 5   DFKLKAEFKPKGSQLEAIAGLVKDLEKNPEKSKQTLLGVTGSGKTFTIANVIEKVQKPTL 64

Query: 87  ILAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDYYQPEAYVARSDTYIEKESQINEQIDR 146
           ++A NKTLAAQLY EFK FFPEN VEYFVS+YDYYQPE+Y+ + D YIEK++QIN +I++
Sbjct: 65  VIAHNKTLAAQLYNEFKEFFPENRVEYFVSYYDYYQPESYIPQKDQYIEKDAQINPKIEQ 124

Query: 147 MRHSATRSLLERDDVIIIASVSCIYGIGSVETYSAMTQDLKVGDEYDQRQVMADLVAQQY 206
           MR  AT ++L R DVII+ASVSCIYG+G+ E +  M  +LKVG++  +  ++  LV  QY
Sbjct: 125 MRLRATSAILSRRDVIIVASVSCIYGLGNPELFKEMGFELKVGEKIKRSDIIEKLVDIQY 184

Query: 207 KRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLSFFGEELEGITEFDPLTGEKTGTFDQI 266
           +RND     G FRV+GD+L+I P + +D   R+  FG+E++ I E DP    K    D  
Sbjct: 185 ERNDMELVPGRFRVKGDTLDIIPGYQDD-ILRVEMFGDEIDRIYELDPKNMSKKHEIDSF 243

Query: 267 RVYANSHYVTPKPTLKQAVISIKEELKMRLDQLVGEGKLLEAQRLEQRTNFDIEMLEATG 326
            +Y   H+V P+   K A+ SI +EL   L  L     +L++ RL+Q+T +DIEM+E TG
Sbjct: 244 YMYPAKHFVIPEEDKKNAINSILKELDEWLPNL----DMLKSHRLKQKTLYDIEMIEETG 299

Query: 327 HCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDHRRKFTL 386
            C GIENYSR+   R  GEP   L ++ P++ ++  DESH ++PQI GMYKGD  RK +L
Sbjct: 300 SCKGIENYSRHFENRKEGEPAYCLLDYFPEDFLIVIDESHQTIPQIRGMYKGDRSRKQSL 359

Query: 387 AEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSKWELEQSSGVFAEQVIRPTGLLDP 446
            ++GFRLPS  DNRPLKFEE+       +FVSATP ++EL+ S+ V  EQ+IRPTGLLDP
Sbjct: 360 IDYGFRLPSAYDNRPLKFEEFKKYMNNVIFVSATPGEYELDNSNQV-VEQIIRPTGLLDP 418

Query: 447 QVEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDID 506
           +VEIRP++ QV+D++ E  ++   G R L+TTLTKR+AE+LTEY+ ++ +K RY+HSDID
Sbjct: 419 EVEIRPIENQVEDIIKETEKMVEKGERVLITTLTKRLAEELTEYLAKRNVKARYLHSDID 478

Query: 507 TLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGR 566
           T+ER EI+R+LRLG FD L+GINLLREGLDIPE G V ILDADKEGFLR++ SLIQTIGR
Sbjct: 479 TIERTEIIRNLRLGKFDCLVGINLLREGLDIPEVGFVGILDADKEGFLRNDKSLIQTIGR 538

Query: 567 AARNAEGRVIMYADRITGSMERALGETNRRRDKQIAYNEEHGITPATVKKNVEDVLAGLY 626
           AARNA  +V++YA ++T S+++A+ ET RRR  Q  +NE+H ITP T+ K + + +    
Sbjct: 539 AARNANSKVVLYAGKMTDSIKKAVSETERRRKLQKEHNEKHNITPQTIVKPIREKV---- 594

Query: 627 AGDVDMNRVTATIDKPMHGANLEAHLAGLREQMRKAAENLEFEEAARLRDEVKRLE 682
              VD++ V     K +  A++   +  L  +M +AAE LEFE+A ++RD + +L+
Sbjct: 595 ---VDISDV-----KHIPVADIPNVIVELEAEMYEAAEALEFEKAIKIRDTIAKLK 642