Pairwise Alignments

Query, 732 a.a., uvrABC system protein B from Phaeobacter inhibens DSM 17395

Subject, 1148 a.a., Transcription-repair-coupling factor from Enterobacter sp. TBS_079

 Score = 54.7 bits (130), Expect = 3e-11
 Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 51/303 (16%)

Query: 66  TGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSF----YDYY 121
           TG      +A++ E    P +++AP+   A +L+ E + F  +N V     +    YD +
Sbjct: 23  TGAACATLVAEIAERHPGPVVLVAPDMQNALRLHDEIRQF-TDNLVFSLADWETLPYDSF 81

Query: 122 QPEAYVARSDTYIEKESQINEQIDRMRHSA----TRSLLERDDVIIIASVSCIYGIGSVE 177
            P   +      I        Q+  M+         +L++R     +   S ++G   V 
Sbjct: 82  SPHQEI------ISSRLSTLYQLPTMQRGVLIVPVNTLMQR-----VCPHSYLHGHALV- 129

Query: 178 TYSAMTQDLKVGDEYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRAW 237
                   +K G    +  + A L +  Y+  DQ  + G +  RG  L+++P    D+ +
Sbjct: 130 --------MKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLYPMG-SDQPY 180

Query: 238 RLSFFGEELEGITEFDPLTGEKTGTFDQIRVYANSHYVTPKPTLKQAVISIKEELKMRLD 297
           RL FF +E++ +  FD  T       D I +     +    PT K A+   + + + R D
Sbjct: 181 RLDFFDDEIDSLRVFDADTQRTLEEVDSINLLPAHEF----PTDKTAIELFRSQWRDRFD 236

Query: 298 QLVGEGKLLEAQRLEQRTNFDIEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDN 357
                    +A+ + Q+ +     L A     GIE +          EP P LF + P N
Sbjct: 237 ------VKRDAEHIYQQVSKG--TLPA-----GIEYWQPLFF----NEPLPALFSYFPAN 279

Query: 358 AIV 360
            ++
Sbjct: 280 TLI 282



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 481  KRMAEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPEC 540
            ++ A+ L E + E  I + +       LER+  + D     F+VL+   ++  G+DIP  
Sbjct: 823  QKAADRLAELVPEARIAIGHGQMRERELERV--MNDFHHQRFNVLVCTTIIETGIDIPTA 880

Query: 541  GLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALGETNRRRDKQ 600
              + I  AD  G       L Q  GR  R+       YA  +T    +A+    ++R + 
Sbjct: 881  NTIIIERADHFGL----AQLHQLRGRVGRSHHQ---AYAWLLT-PHPKAMTTDAQKRLEA 932

Query: 601  IAYNEEHGITPATVKKNVEDVLAGLYAGDVDMNRVTATIDKPMHGANLEAHLAGLREQMR 660
            IA  E+ G   A    ++E   AG   G+ D +    TI   ++   LE  +  L+    
Sbjct: 933  IASLEDLGAGFALATHDLEIRGAGELLGE-DQSGSMETIGFSLYMELLENAVDALKAGRE 991

Query: 661  KAAENLEFEE 670
             + E+L  ++
Sbjct: 992  PSLEDLTSQQ 1001