Pairwise Alignments

Query, 370 a.a., phase integrase-like protein from Phaeobacter inhibens DSM 17395

Subject, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 67/295 (22%), Positives = 108/295 (36%), Gaps = 28/295 (9%)

Query: 51  LAYDAAVNPVSDVPKTRGAEGTIDYVVSHYRGNQKFTVLAPSTRYGKGKRLDWICQLIGP 110
           L Y     PV  +     AE        H++ +         TR+        I  ++G 
Sbjct: 80  LRYGVVSEPVPSLTLCAFAEEFFPRYARHWKPSTLLNSQRGFTRH--------IAPVLGD 131

Query: 111 ARLADLETRHIENLMD-RKGGPDAANRLLKELS------ELFEYARKRLGMNIRNPTVSV 163
             LA L  +HIE   D        ANRLL  LS      E++EY   +      NP    
Sbjct: 132 VPLAALTRQHIEQWFDGMHASKGMANRLLPLLSVMMQQAEVYEYRPAQ-----SNPCKGF 186

Query: 164 DRRKTRNGGYHTWTIAEVKKF----RDHHPSGTMARLALELMLATGAARQDACGMGRHNI 219
            R K+ +   +  +  E+K+       H  +  +A + L L++ TG    + C +   + 
Sbjct: 187 KRYKSTHSERYL-SEEELKRLWLALDSHEKASPVAVMVLRLLILTGCRCNEVCSVKWADY 245

Query: 220 KGDVIYYRRGKTGQDTELPLAYMPNLVAEIVQLPPDASVFLTHSNGKTYTVESFGNWFRD 279
           +    Y    KTG  T    ++   L+++  Q+     +F   S  + +T      ++R 
Sbjct: 246 RQGHWYLPDSKTGAKTVFLSSFARELLSDWPQV--SEHLFWHQSPSQPFTPACLDRFWRP 303

Query: 280 QCVAAGLPDNCRAHGLRKHGATELAEAGANEFQIMAFLAHKSTHEALRYVRAAQR 334
                 L D  R H LR   A+   +   N   I   L H      L+Y   A+R
Sbjct: 304 FRETIHLND-VRIHDLRHTYASIAVKHNINILTIGRLLGHALPETTLKYTHLAKR 357