Pairwise Alignments

Query, 505 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 524 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  179 bits (454), Expect = 2e-49
 Identities = 146/531 (27%), Positives = 247/531 (46%), Gaps = 61/531 (11%)

Query: 16  PLFSDLSLTLSKGDRIGLVAANGRGKSTLLACLANELPPTTGEITRARGLRIGYVTQSLP 75
           PLF ++S+    G+R GL+ ANG GKST +  L  +L P+ G ++     R+G + Q   
Sbjct: 7   PLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNERLGKLRQDQF 66

Query: 76  A------------------------DAL----PITLYDWVLAA-LPADQADYESWRVDVV 106
           A                        DA+      T  D++ AA L A  A+Y+ +  +  
Sbjct: 67  AYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAEAR 126

Query: 107 LDELQ----VPYDFQHQPLGTLSGGWQRTAMLASAWINTPDLLLLDEPTNHLDLQRIAFL 162
             EL     VP +  + P+  ++ GW+   +LA A  + PD+LLLDEPTN+LD+  I +L
Sbjct: 127 AGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWL 186

Query: 163 EGWLSQRPRDLPMVITSHDRAFLDATTTRTLFLRTEGSRVFQLPFSAARSALDDHDAAEA 222
           E  L++R  +  M+I SHDR FL+   T    +     +++   +       DD+  A +
Sbjct: 187 EEVLNER--NSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNY-------DDYMLASS 237

Query: 223 RRHSNDLKKAQQLRQQAAKLKNVGTNSGSDLLLTKTKQLADRADRLEAAATPAHREHSAG 282
           +  +  L    + +++ A+L++      ++   +K +Q   RA +++       +  S  
Sbjct: 238 QARAQQLAANAKAKEKVAELQDFVRRFSANK--SKARQATSRAKQIDKIKVEDIKPSSRV 295

Query: 283 DIRLGNSGTHAKALITLDDLTVDTPDGRPLYTTGKKWITPGDRIVLLGANGTGKTQLVRM 342
           +  +   G      + ++   +     R ++      +  G++I ++GANG GKT L+R 
Sbjct: 296 NPFIRFEGEKKLHRLAVETQGITKTYDRDIFKNFSIMVEAGEKIAIIGANGAGKTTLLRS 355

Query: 343 IQQALTGARAD---IKCAPSVVPAYSDQH-LSQLSGPETPLALVTAASDVGDQS------ 392
           I   +TG   D   +K A +    Y  Q    + +G ET    +   +  GD        
Sbjct: 356 IGGDVTGLHPDGGLVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQAVRGI 415

Query: 393 -ARSLLAGAGVKFVLQDASVAALSGGQKARLAMLLLRLKNPNFYLLDEPTNHLDIEGQEA 451
             R L +G  VK      SV  LSGG+K R+    L L   N  L+DEPTNH+D+E  E+
Sbjct: 416 LGRLLFSGDDVK-----KSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIES 470

Query: 452 LEAELVAHGAACLLVSHDRSFLRAVGNRFWQIR-GRRLEEVADPEAFLASE 501
           L   L  +    + VSHDR F+ ++  R  +++ G+ ++     E +LAS+
Sbjct: 471 LNIALEKYAGTLIFVSHDREFVSSLATRILEVKDGQVIDFQGGYEDYLASQ 521



 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 38/205 (18%)

Query: 310 RPLYTTGKKWITPGDRIVLLGANGTGKTQLVRMIQQALTGARADIKC------------- 356
           +PL+         G+R  L+GANG GK+  ++++   L  +  ++               
Sbjct: 6   KPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNERLGKLRQDQ 65

Query: 357 -------APSVVPAYSDQHLSQLSGPETPLALVTAASD------------------VGDQ 391
                     VV     +  + +S  +   A   A  D                    + 
Sbjct: 66  FAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAEA 125

Query: 392 SARSLLAGAGVKFVLQDASVAALSGGQKARLAMLLLRLKNPNFYLLDEPTNHLDIEGQEA 451
            A  LL G GV     +  ++ ++ G K R+ +      NP+  LLDEPTN+LDI     
Sbjct: 126 RAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRW 185

Query: 452 LEAELVAHGAACLLVSHDRSFLRAV 476
           LE  L    +  +++SHDR FL  V
Sbjct: 186 LEEVLNERNSTMIIISHDRHFLNQV 210