Pairwise Alignments

Query, 505 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

Subject, 618 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  216 bits (550), Expect = 2e-60
 Identities = 166/520 (31%), Positives = 232/520 (44%), Gaps = 42/520 (8%)

Query: 14  GDPLFSDLSLTLSKGDRIGLVAANGRGKSTLLACLANELPPTTGEITRARGLRIGYVTQS 73
           G PL    S  +  G ++GLV  NG GK+TL   +  EL   TGEIT  RG RIG V+Q 
Sbjct: 13  GRPLLEHASAVIPSGHKVGLVGRNGTGKTTLFRLIRGELTLDTGEITLPRGARIGGVSQE 72

Query: 74  LPADALPITLYDWVLAA----------------------LPADQADYESW----RVDVVL 107
           +P +   ++L + VLAA                      +    AD ++W    R   +L
Sbjct: 73  VPGNE--VSLLNTVLAADTERAGLMAEAETATDPGRIAEIQTRLADIDAWSAEARASSIL 130

Query: 108 DELQVPYDFQHQPLGTLSGGWQRTAMLASAWINTPDLLLLDEPTNHLDLQRIAFLEGWLS 167
             L       HQP    SGGW+    LA+   + PDLLLLDEPTN+LDL+   +LE +L+
Sbjct: 131 RGLGFTEPETHQPCSAFSGGWRMRVALAAVLFSQPDLLLLDEPTNYLDLEGALWLEAYLA 190

Query: 168 QRPRDLPMVITSHDRAFLDATTTRTLFLRTEGSRVFQLPFSAARSALDDHDAAEARRHSN 227
           + P  +  +I SHDR  L+      L L       +  P+            A  R    
Sbjct: 191 RYPHTV--LIVSHDRGLLNRAVGGILHLEDRKLTFYTGPYD---------QFARQRAEKR 239

Query: 228 DLKKAQQLRQQAAKLKNVGTNSGSDLLLTKTKQLADRADRLEAAATPAHREHSAGDIRLG 287
            L+ A   +Q A +       +      +K KQ   R   LE   T    E +A  +   
Sbjct: 240 ALQAAAARKQDAKRAHLESFVNRFKAKASKAKQAQSRVKMLEKMETIRVPEDAARTVFTF 299

Query: 288 NSGTHAKALITLDDLTVDTPDGRPLYTTGKKWITPGDRIVLLGANGTGKTQLVRMIQQAL 347
            +       I   +      DG  +       I   DRI LLG NG GK+ L +++   L
Sbjct: 300 PTPEELSPPIVATEGASVGYDGTAVLRGLSLRIDQDDRIALLGRNGEGKSTLSKLLAGRL 359

Query: 348 TGARADIKCAPSVVPAYSDQH-LSQLSGPETPLA-LVTAASDVGDQSARSLLAGAGVKFV 405
                 +  +  +   +  QH + +L   ETPL  L+    D G    R+ LAG G+   
Sbjct: 360 EAMDGTLTASNKLRIGFFAQHQVDELRVEETPLQHLLRVRPDEGQARLRARLAGFGLMAA 419

Query: 406 LQDASVAALSGGQKARLAMLLLRLKNPNFYLLDEPTNHLDIEGQEALEAELVAHGAACLL 465
             +  V  LSGGQKARL++LL  L  P+  +LDEPTNHLDIE +EAL   L A+  A +L
Sbjct: 420 QAETEVGRLSGGQKARLSLLLATLDAPHLLILDEPTNHLDIESREALVEALTAYTGAVIL 479

Query: 466 VSHDRSFLRAVGNRFWQIRGRRLEEVADP-EAFLASEMAP 504
           VSHD   L  V +R W ++   +    D  EA+    + P
Sbjct: 480 VSHDMHLLSLVADRLWLVKDGHVAPYEDDLEAYRQMLLTP 519



 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 35/214 (16%)

Query: 296 LITLDDLTVDTPDGRPLYTTGKKWITPGDRIVLLGANGTGKTQLVRMIQQALT------- 348
           ++ +DD++    +GRPL       I  G ++ L+G NGTGKT L R+I+  LT       
Sbjct: 1   MLRIDDISYSV-EGRPLLEHASAVIPSGHKVGLVGRNGTGKTTLFRLIRGELTLDTGEIT 59

Query: 349 ---GAR---------------------ADIKCAPSVVPAYSDQHLSQLSGPETPLALVTA 384
              GAR                     AD + A  +  A +     +++  +T LA + A
Sbjct: 60  LPRGARIGGVSQEVPGNEVSLLNTVLAADTERAGLMAEAETATDPGRIAEIQTRLADIDA 119

Query: 385 ASDVGDQSARSLLAGAGVKFVLQDASVAALSGGQKARLAMLLLRLKNPNFYLLDEPTNHL 444
            S   +  A S+L G G          +A SGG + R+A+  +    P+  LLDEPTN+L
Sbjct: 120 WS--AEARASSILRGLGFTEPETHQPCSAFSGGWRMRVALAAVLFSQPDLLLLDEPTNYL 177

Query: 445 DIEGQEALEAELVAHGAACLLVSHDRSFL-RAVG 477
           D+EG   LEA L  +    L+VSHDR  L RAVG
Sbjct: 178 DLEGALWLEAYLARYPHTVLIVSHDRGLLNRAVG 211