Pairwise Alignments

Query, 347 a.a., putative secretion protein from Phaeobacter inhibens DSM 17395

Subject, 360 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (280), Expect = 1e-29
 Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 19/345 (5%)

Query: 11  IAALMLVGVPALAADV----LKPVKLM-VTQSGAMPIHREFYGQVAAKETVDLAFQVGGQ 65
           +  L+L G    +A++    ++PVKL+ +T+ G+  + R F  +VAA +  +L+F++ GQ
Sbjct: 12  VLTLVLAGCSTESAEIAPESVRPVKLLEITELGSGTL-RSFPAKVAATKQAELSFRLSGQ 70

Query: 66  VVKFPVTEGAFVPKGALVAELDLEPFELKLGQAQLQKEQADRTVTRLEKL--TGTVSQVS 123
           +++F + +G  V KG ++A LD      +L   +   E A     R  +L     +SQ  
Sbjct: 71  LIEFSLVDGQRVTKGEVLARLDDRDARNQLLNREADHELAQADFNRKGELLRQALISQAE 130

Query: 124 IDDAETQAGLSRIALRDADYALEHATLNAPFDALVSSREVALFSTVSAGAPVVRLHDMSE 183
            D A+ Q   S   L  A   L +  + APF   V+  ++  F  V A  PV+ L     
Sbjct: 131 YDLAKAQLKSSAANLASAQDQLSYTVIKAPFSGTVAKTKIENFQIVQANQPVLVLQKDRF 190

Query: 184 LHIEVDVPEVLFQQ----GEDNDALTITATFPGSDTAYPLEILEFDAEASSVGQTYRVTF 239
           + + + VPE L  +       + +L +       +  Y   + EF  + +   Q+Y V F
Sbjct: 191 IDVVIQVPESLASRVTSFNPHSPSLPMVTFSNHPEQQYAARLKEFATQVTPGTQSYEVVF 250

Query: 240 RLDPPKDRQIFPGASTTVRVTV---DTGASAIVVPPTAIVPA-ANGETGVMLFSPKGGDE 295
            L  P +  + PG S  + + +   D    + +VPP+A++    +GE  V  +       
Sbjct: 251 TLPTPTEFSVLPGMSAQLILDIAGPDAKKKSAIVPPSAVLKRDQDGEPIVWTYDL---GT 307

Query: 296 GTVTWTKVETAATDGGQIEITSGLQGGEEIVLTGGGALADGEAVR 340
           G V+  KV         IEIT GL  G+ +V+ G   L + + V+
Sbjct: 308 GQVSARKVSLGKVTSQGIEITQGLTVGDRVVVAGVAQLHESQQVK 352