Pairwise Alignments

Query, 347 a.a., putative secretion protein from Phaeobacter inhibens DSM 17395

Subject, 360 a.a., HlyD family-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 12/298 (4%)

Query: 45  EFYGQVAAKETVDLAFQVGGQVVKFPVTEGAFVPKGALVAELDLEPFELKLGQAQLQKEQ 104
           E  G   A E+V +  +V   V      +G  V KG L+ +L       K+  AQ++   
Sbjct: 52  EAIGTNKAYESVTITPKVTDVVTSLKFDDGDIVKKGDLLVQLQNAEQLAKVKVAQVKVSD 111

Query: 105 ADRTVTRLEKL--TGTVSQVSIDDAETQAGLSRIALRDADYALEHATLNAPFDALVSSRE 162
             R + R+  L  + TV+++  D  +T    +R  L  A  +L   ++ APF+  +  R+
Sbjct: 112 NQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQSSLNDRSIVAPFNGRLGLRQ 171

Query: 163 VALFSTVSAGAPVVRLHDMSELHIEVDVPEVLFQQGEDNDALTITA-TFPGSDTAYPLEI 221
           V++ S V+ G  +  L D+S++ ++  VPE   Q+ +    +   A  FP  D  +  ++
Sbjct: 172 VSVGSLVTPGTEISTLDDISKIKLDFSVPERFIQELQPGKLVEAKAVAFP--DEIFKGKV 229

Query: 222 LEFDAEASSVGQTYRVTFRLDPPKDRQIFPGASTTVRVTVDTGASAIVVPPTAIVPAANG 281
           +  D+  +   +   V   + P  D ++ PG    V++ +     A+++P +AI+P    
Sbjct: 230 ISIDSRVNPTTRAVIVRAEI-PNHDLRLLPGMLMKVKL-IKRSREALMLPESAIIPIQKS 287

Query: 282 ETGVMLFSPKGGDEGTVTWTKVETAATDGGQIEITSGLQGGEEIVLTGGGALADGEAV 339
                 F      +  +   +V       G +EIT GL  GE +V+ G   +  G+ V
Sbjct: 288 H-----FVYSVNKDNVIERKQVTIGIRTRGWVEITDGLAIGENVVIRGLLKVHPGDVV 340