Pairwise Alignments

Query, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

 Score = 1041 bits (2693), Expect = 0.0
 Identities = 554/1121 (49%), Positives = 755/1121 (67%), Gaps = 52/1121 (4%)

Query: 3    KRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGLAD 62
            KR DI+ +MI+G+GPI+IGQA EFD+SG+QACK+L+EEG   ILVNSNPATI TD  +AD
Sbjct: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61

Query: 63   ATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKREA 122
              Y+EP+ P+++ KIIEKE+PDA+LPTMGGQTGLN A+ L + G+L K  VE++G+    
Sbjct: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESV 121

Query: 123  IEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGNADLDAGVQMALDELEDIGLPAIIR 182
            IE +EDR LF +AM+ +     ++  + +             V+ A+   +++G PAI+R
Sbjct: 122  IETSEDRDLFNKAMEEINQPIAKSAAVHS-------------VEEAIGATKELGYPAIVR 168

Query: 183  PAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADNAI 242
            PAFTLGGTGGG+A N E+ I   + G+  S + Q+L+D+SLLGWKEYE EV+RD  D  I
Sbjct: 169  PAFTLGGTGGGIANNEEELIEITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCI 228

Query: 243  IVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWAVN 302
            +VC++ENIDPMG+HTG+SI  AP+ TL+D+ +Q +R AS+ ++R + +E GG NVQ+AVN
Sbjct: 229  VVCNMENIDPMGIHTGESIVTAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVN 287

Query: 303  PADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDITGVTPASFEP 362
            P     VVIE+NPRVSRSSALASKATG+PIAKIAAK+A+G TLDE+ ND+T  TPASFEP
Sbjct: 288  PEMTDYVVIEVNPRVSRSSALASKATGYPIAKIAAKIAIGRTLDEIQNDVTKETPASFEP 347

Query: 363  TIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLTGFD 422
            TIDYVV KIPR+ F+KF   +  L T+MKS GE MAIGR + E+LQKA+ S++ G  G  
Sbjct: 348  TIDYVVVKIPRWPFDKFRTVDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGI- 406

Query: 423  EVAIPGAEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLARIR 482
               I   +D+    + ++  +   T +R+  IA A+  G S D I   T  +P+F+ +I+
Sbjct: 407  ---IADGKDKEYSNSEIVDILEHATDERLFVIAYALDKGWSVDGICERTGINPFFIEKIK 463

Query: 483  EIVEAEAKIRA-EGLPQDEHGLRAI----KMLGFTDARLAMLTDQREGDIRAARRALGVN 537
            +I++ + ++     +P D+  L+ I    K LGF+D +++ +  + E +IR  R+ L V 
Sbjct: 464  KIIDCKKELEVISRIPVDDEKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVI 523

Query: 538  AVFKRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEF 597
             V+K +DTCAAEFEA+TPY YS YE   F + + E+  SD+KKV+ILG GP RIGQG+EF
Sbjct: 524  PVYKMVDTCAAEFEAKTPYYYSAYER-YFDEEQNESVSSDRKKVIILGSGPIRIGQGVEF 582

Query: 598  DYCCCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENGT 657
            DY   HA FAL + G E I++N NPETVSTDYDTSD+LYFEPL +E +M I+  E +NG 
Sbjct: 583  DYSTVHAIFALKELGIEAIIVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQ 642

Query: 658  LHGVIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNGI 717
            L GVIVQFGGQT + LA  L   G+ ILGTSP +IDLAEDR++F  ++ +L + Q     
Sbjct: 643  LLGVIVQFGGQTAINLAMKLYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGAT 702

Query: 718  ASTDAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLDS 777
            A ++ QAL++ E IG+P ++RPSYVLGGRAM+IV + + LK Y+ EAV VS D P+L+D 
Sbjct: 703  AFSEEQALKVVERIGYPALVRPSYVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDK 762

Query: 778  YLSGAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTN 837
            +L  AVE+DVDA+CDG  V +  IM+HIEEAG+HSGDSAC +PP +LSKEVI ++   T 
Sbjct: 763  FLEEAVEVDVDAVCDGESVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEHTT 822

Query: 838  ALAKALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVM 897
             LA  L V+GL+NIQ+AVK   DG  V+Y+IE NPRASRT+P+V+KS    +A IA   +
Sbjct: 823  KLALELGVIGLLNIQYAVK---DG--VVYIIEANPRASRTIPYVSKSVGVPLAKIATNAI 877

Query: 898  AGEPLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLG 957
             G+ L           + GY                  + SVKEAV PF + PGVD +L 
Sbjct: 878  MGKKLK----------EMGY-----------FGLAKSKYVSVKEAVFPFLKLPGVDPVLS 916

Query: 958  PEMRSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQ 1017
            PEM+STGE +G D+ F +AF K+Q+ A M LP+ G  FIS+++ DK  +    AK     
Sbjct: 917  PEMKSTGEAIGIDQDFGKAFYKSQLSANMELPTSGTVFISVRNRDKDNI-TKIAKKYHNL 975

Query: 1018 GFTLVATRGTQSWLDGHGVPCELVNKVYEGRPH-VVDMLKDGNVQLLMNTTEGAQAVQDS 1076
            GF +VATRGT   L    +P   V K+ E   + V+D+++ G V L++NT+ G +A  D 
Sbjct: 976  GFEIVATRGTARELRLFDIPVREVRKISESMQNSVLDLMQKGEVDLIINTSSGDKAKTDG 1035

Query: 1077 KDMRSVALYDKIPYFTTAAGANAAARAIKAQAEGDVEVKSL 1117
              +R  A+   IP  TT  GA AA +AI+A   G++ V SL
Sbjct: 1036 YFIRRAAVELNIPCMTTLQGAYAAIKAIEAIKSGELGVYSL 1076