Pairwise Alignments

Query, 1119 a.a., carbamoyl-phosphate synthase large chain from Phaeobacter inhibens DSM 17395

Subject, 694 a.a., acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.8 bits (177), Expect = 9e-17
 Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 15/237 (6%)

Query: 674 ANALEEEGIPILGTSPDAIDLAEDRERFQALVN--QLGLKQPHNGIASTDAQALEIAEEI 731
           A   E  GI  +G   DAID    +   +A++   Q+ L   ++G   TDA     A +I
Sbjct: 102 ARKCEAAGIVFVGPGSDAIDAMGSKSAAKAIMTAAQVPLVPGYHGDDQTDATLKAEALKI 161

Query: 732 GFPLVIRPSYVLGGRAMEIVRD----MDQLKRYIAEAVVVSGDSPVLLDSYLSGAVELDV 787
           GFP++I+ +Y  GG+ M IV      MD +     EA    G+  +L++ YL     ++V
Sbjct: 162 GFPMLIKAAYGGGGKGMRIVEHEGEIMDAINSARREAASSFGNDKLLMERYLRQPRHVEV 221

Query: 788 DAICD--GTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNALAKALNV 845
               D  G  ++++     I+       + A   P   LS E+ A++     A AKA++ 
Sbjct: 222 QVFADTFGNAIYLSDRDCSIQRRHQKVVEEA---PAPGLSDELRAQMGEAAVAAAKAIDY 278

Query: 846 VGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMAGEPL 902
           VG   I+F +  D    +  Y +E+N R     P     T   +      V +G+PL
Sbjct: 279 VGAGTIEFLLDTD----NSFYFMEMNTRLQVEHPVTEMVTGQDLVKWQLMVASGQPL 331



 Score = 47.0 bits (110), Expect = 5e-09
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 25/244 (10%)

Query: 134 EAMDRLGLENPRATIITAPKKD-----NGNADLDAGVQMALDELEDIGLPAIIRPAFTLG 188
           +A+D +G ++    I+TA +       +G+   DA ++    E   IG P +I+ A+  G
Sbjct: 118 DAIDAMGSKSAAKAIMTAAQVPLVPGYHGDDQTDATLKA---EALKIGFPMLIKAAYGGG 174

Query: 189 GTGGGVAYNR---EDYIHFCRSGMDASPVN-QILVDESLLGWKEYEMEVVRDTADNAIIV 244
           G G  +  +     D I+  R    +S  N ++L++  L   +  E++V  DT  NAI +
Sbjct: 175 GKGMRIVEHEGEIMDAINSARREAASSFGNDKLLMERYLRQPRHVEVQVFADTFGNAIYL 234

Query: 245 ----CSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA 300
               CSI+      V        APA  L+D+    M  A++A  + I    G   +++ 
Sbjct: 235 SDRDCSIQRRHQKVVEE------APAPGLSDELRAQMGEAAVAAAKAIDY-VGAGTIEFL 287

Query: 301 VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDITGVTPASF 360
           ++  D     +EMN R+     +    TG  + K    +A G  L  L  D   +   +F
Sbjct: 288 LD-TDNSFYFMEMNTRLQVEHPVTEMVTGQDLVKWQLMVASGQPL-PLKQDEVRIHGHAF 345

Query: 361 EPTI 364
           E  I
Sbjct: 346 EVRI 349