Pairwise Alignments

Query, 650 a.a., Uncharacterized protein involved in outer membrane biogenesis from Phaeobacter inhibens DSM 17395

Subject, 604 a.a., AsmA protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (263), Expect = 5e-27
 Identities = 147/652 (22%), Positives = 259/652 (39%), Gaps = 87/652 (13%)

Query: 1   MKLI--IRVVIALVVAMVLLLGALLLLPGEKLAQLAAAQIEKQTGRTVTFGGRVGYTLWP 58
           MKLI  I   IA +  +V+L   L+  P +    L  A +++QTGR +     + +  +P
Sbjct: 1   MKLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDA-VKEQTGRDLVIEEPLSWQFFP 59

Query: 59  TLGVKADRVALSNAPWAGPEPMLTAERLTIGVAAADLIAGKVRVTELSAVLPQLNLSTRA 118
           ++G++   V+LSN        M+  + +   V    L++  V++ +L     +L L T  
Sbjct: 60  SIGIRLAGVSLSNPEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTK 119

Query: 119 DGTGNWVLDPASDGETKS-VPATPGSMDSL-PVSIEALNLTGATLRY---APHGETPIEM 173
            G  +  LD  +   T +  PA       L  +SI  +N++  ++     A        +
Sbjct: 120 QGKSS--LDGLTGNTTSADKPADVKQGPGLNAISIGGINISDTSITLIDEAAGSSQTFTL 177

Query: 174 KQIDLALQWPDPT-------GTVVADITLRPAGDPVQIEAEIGTFEAFLAGQVSSVGATV 226
             + L    P          G  + D+ ++  G     EA +   EAF A  +  +   V
Sbjct: 178 SSLTLGEFTPGKAAPLAFAFGADLPDMKVKGEG-----EATLTVSEAFNALSLVGLNLEV 232

Query: 227 TAADTFLRFDGRANTAGAATGRMTGKSTDLARSLAVLGAAQGIEVPAVKTWLLGSDLTYT 286
            A        G +   GA T    G            GA   +E    K           
Sbjct: 233 NA-------QGNSLPKGAVTVEFAG------------GADVALEAKTAK----------L 263

Query: 287 TDGRLALRDLTLEADANKLRGAADVTLG-DVPKVTARLSGDQLDLSALLPSGDTDLPAAA 345
           T  +L L D+       + +GA     G  VP V   L+   +D+ A+L +  +   A  
Sbjct: 264 TVDKLTLMDI-------EGKGAIAANYGKKVPFVDVELAFGAIDVDAILGTEKSQTKA-- 314

Query: 346 AAGAGDDPVNDGWSRERMDFGWLAALNTEIALDVQGVETGSVRLGPSKLDLSLDNSRAVL 405
                 D      +++  D   + A++ ++ LD+  V+   +      L  +L      +
Sbjct: 315 ------DSTAPDTAQKEPDLSGMKAVDAKLKLDIAAVKVAGLSTADWALRANLAGGVLKV 368

Query: 406 KFQPATVFDGQLQGQVVVNNRNGLSV-GGKLSFQNIRLEQALGQTMGYDRLNGEALGELE 464
               A+++ G++     ++ R   +V     +   +++   L      D L G A  +++
Sbjct: 369 DELKASLYGGKVGASATLDGRKVPAVYSFNKAITGVQILPLLKDAAEVDLLAGTANFDIQ 428

Query: 465 YLGVGNSVAEIMSSLSGKGWLEVGKGFFTGFDLEQLMR------------SGSGNGGSTV 512
             G G     I  +L+  G  EV  G   G ++ Q++R            +  G    T 
Sbjct: 429 GKGAGLLADNIKRNLNANGKFEVADGALYGVNVPQMIRDAQAKLKGDLNAAAGGEEKKTD 488

Query: 513 FDQLTASYSMEGGNLTNNDLLLTLRGLRAEGEGRIGLGAQDLDYLFTP----SLQRGDGS 568
           F  LT S ++  G   N DLL+    LR  G+G   L A+ LDY        SL+   G 
Sbjct: 489 FSSLTGSLNIAAGKANNPDLLMLSPLLRISGQGGADLMAETLDYKLATKVVGSLEGQGGD 548

Query: 569 TRLS---IPVAITGPWSDPKIRPDLKRALEPEIDAVEQQAKDRLREKLSEEL 617
           T L+   IP+AITG +++PK   D +  L+ ++     + KD+L++ L ++L
Sbjct: 549 TALAGIEIPLAITGSFTEPKFALDTEALLKGQLKGETDKLKDKLKDSLFKKL 600