Pairwise Alignments

Query, 650 a.a., Uncharacterized protein involved in outer membrane biogenesis from Phaeobacter inhibens DSM 17395

Subject, 614 a.a., AsmA family protein (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (277), Expect = 1e-28
 Identities = 139/647 (21%), Positives = 259/647 (40%), Gaps = 66/647 (10%)

Query: 1   MKLIIRVVIALVVAMVLLLGALLLL--PGEKLAQLAAAQIEKQTGRTVTFGGRVGYTLWP 58
           MK +  ++I      +LL+  L L+  P +   Q+  A ++KQTGR +     + +T +P
Sbjct: 1   MKFVKWLLIVFASLFLLLIAYLTLIFDPNDFKPQIVEA-VKKQTGRDLVIKQDLSWTFFP 59

Query: 59  TLGVKADRVALSNAPWAGPEPMLTAERLTIGVAAADLIAGKVRVTELSAVLPQLNLSTRA 118
           ++G+    ++LSN      + ML  + +   VA   L++ +V + +L+     LN  +  
Sbjct: 60  SIGIALGDISLSNPEGFKHDTMLKVDGIVAEVALMPLLSKEVEIAQLNLDGLTLNFDSYK 119

Query: 119 DGTGNWVLDPASDGETKSVPATPGSMDSLPVSIEALNLTGATLRYAPHGETPIEMKQIDL 178
           +G  +     ++  +        GS  +  VS++  +L          G   I   Q++L
Sbjct: 120 NGRSSMDGLTSTGEKADKAGDKTGSDGAAQVSVQLSSLN--------IGGIAITNTQVNL 171

Query: 179 ALQWPDPTGTVVADITLRPAGDPVQIEAEIGTFEAFLAGQVSSVGATVTAADTFLRFDGR 238
              + + TG   A            +  E  T   F  GQ + +G   +     ++   +
Sbjct: 172 ---YDEATGKTQA------------LTLESLTLGEFSLGQFADLGYKFSMTQPEMKVSSQ 216

Query: 239 AN---TAGAATGRMTGKSTDLARSLAVLGAAQGIEVPAVKTWL-LGSDLTYTTDGR-LAL 293
                    +  ++  K  ++  SL      +G  +P  +  + L + L    + + +AL
Sbjct: 217 GKGQIKVDPSLAKIAIKDFEIENSL------EGDAIPNKRMNINLTTQLELDNNAKTMAL 270

Query: 294 RDLTLEADANKLRGAADVTLG-DVPKVTARLSGDQLDLSALLPSGD-TDLPAAAAAGAGD 351
              +L  +  K +G   V  G  VP V A +S   +D++  +   D T      A G G 
Sbjct: 271 VLSSLNVEQIKAQGKMSVNYGAKVPDVVASMSFGDVDVTPFMAKDDGTKGEDKTAKGEGT 330

Query: 352 DPVNDGWSRERMDFGWLAALNTEIALDVQGVETGSVRLGPSKLDLSLDNSRAVLKFQPAT 411
            P  +       D   + A+N ++ LD + V    ++     + L+L N    +    A 
Sbjct: 331 APAKEP------DLSGMKAVNLKLDLDAKSVTADKIKTENWLMKLTLKNGVLDVSQLSAE 384

Query: 412 VFDGQLQGQVVVNNRNGL-SVGGKLSFQNIRLEQALGQTMGYDRLNGEALGELEYLGVGN 470
           ++ G+L     ++ R  + S         I++   L      D L G    E+   G   
Sbjct: 385 LYQGKLLASAQLDGRKPVASYRFNKKISGIKVRPLLTDAAEVDMLAGTTNFEVTGSGYSL 444

Query: 471 SVAEIMSSLSGKGWLEVGKGFFTGFDLEQLMRSGSGNGGS-----------TVFDQLTAS 519
               I  +L  KG  E+  G   G ++ Q++R      G            T F  LT S
Sbjct: 445 IPDNIKRNLDAKGQFEIADGALYGVNIPQMLRDAKAKLGGNLNAASSGEKKTDFTSLTGS 504

Query: 520 YSMEGGNLTNNDLLLTLRGLRAEGEGRIGLGAQDLDYLFTPSLQ---RGDGSTR------ 570
           +++  G + N DL +    +R +G+G + L ++ +DY    S+     G G         
Sbjct: 505 FTVAKGIVNNPDLNMASPLIRLQGKGNVNLLSEAIDYALKTSVVGSLEGQGGAEKDVLYG 564

Query: 571 LSIPVAITGPWSDPKIRPDLKRALEPEIDAVEQQAKDRLREKLSEEL 617
           + IP AI G  S+PK   D     + ++    ++A D L++KL ++L
Sbjct: 565 IEIPFAIAGTISEPKFSLDTAALFDAKLKKETEKATDELKDKLFKKL 611