Pairwise Alignments

Query, 521 a.a., exodeoxyribonuclease 7 large subunit from Phaeobacter inhibens DSM 17395

Subject, 465 a.a., exodeoxyribonuclease VII large subunit from Herbaspirillum seropedicae SmR1

 Score =  262 bits (669), Expect = 2e-74
 Identities = 181/487 (37%), Positives = 253/487 (51%), Gaps = 46/487 (9%)

Query: 2   SDLFDDPAPSDRPGQNA--------PEFTVSEISGEVKRTLEGTFGRIRVKGEVGRVFKA 53
           SD F  P P+ RP   A        P  TVS ++  V R LE  F  + VKGEV    +A
Sbjct: 3   SDKFP-PFPTARPLAPAAPSADGGPPMLTVSALNQAVGRMLERNFPLLWVKGEVSNFTRA 61

Query: 54  RSGHLYYDIKDDRSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEV 113
            SGH Y+++KD+ + +    +KG+      +P EG +V V   +T +  +  Y +NV+ +
Sbjct: 62  ASGHWYFNLKDEGAQVRAVMFKGRAQYAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAI 121

Query: 114 AVAGQGALMALLEKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRD 173
             +G G L A   + K++LE EGLFA ERK+ LP  P+ IG+VTSP  A +RD+L  LR 
Sbjct: 122 RRSGVGDLYAAFLQLKERLEREGLFARERKRALPGFPRRIGIVTSPQAAALRDVLTTLRR 181

Query: 174 RFPR-KVLVWPVAVQGANCAPEVARAIEGFNQLTPGGALPRP--DLIIVARGGGSIEDLW 230
           R P  +V+++P  VQG      +A AI        G A  R   D+++V RGGGSIEDLW
Sbjct: 182 RAPHVEVVLYPTPVQGEGAGQRIAAAI--------GRASERAECDVLLVCRGGGSIEDLW 233

Query: 231 GFNEETVARAVANSQIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWT 290
            FNEE VARA+  + +P+IS VGHETD T+ DF +D RAPTPTAAAELA   R + L   
Sbjct: 234 SFNEEVVARAIVAATMPVISGVGHETDFTIADFAADLRAPTPTAAAELAASSRQDWLAEL 293

Query: 291 ENQGARLVRSAGQAVQQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVER 350
               A L R+  + +  + Q ++ L+R L  P   ++  R +L  +  RL  A    + R
Sbjct: 294 RGHAADLTRALRRTLADKAQSVDWLSRRLVSPSAYIQHERVKLLALQNRLSHANQIPLTR 353

Query: 351 RRLRLSEAAAALRPSTLRQLVGARQDRLRNLSSRLTLRPIQQDLARQHDRIGQLTQRLEA 410
            R  L + A+ L      QL   R  R              +DLA       +L +RL+ 
Sbjct: 354 MRHGLQQLASRL----AHQLPDTRHAR--------------RDLA-------ELARRLQR 388

Query: 411 VQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VITRATEAATQPRLRIEF 469
            Q  +    RQ L     QLE+L+ + TLERGYA+V    G V+    E A +  + I  
Sbjct: 389 AQGAQQSAQRQTLTTLHSQLELLNPQRTLERGYAIVSDHQGRVLHSPAELAARSEITIRL 448

Query: 470 ADAEIDV 476
           A    +V
Sbjct: 449 AQGSAEV 455